DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cam and EFCAB9

DIOPT Version :9

Sequence 1:NP_001246276.1 Gene:Cam / 36329 FlyBaseID:FBgn0000253 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_001164654.1 Gene:EFCAB9 / 285588 HGNCID:34530 Length:197 Species:Homo sapiens


Alignment Length:146 Identity:32/146 - (21%)
Similarity:65/146 - (44%) Gaps:13/146 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
            |:...:....|.|.:.|..|..|:........:..: .:..:|::..:.:.:|.:..|.|||.:|
Human    21 LSVRNVKALAEYFHILDVHGKNTLNDVLFYHFLHHV-TDLKKAQINIVFDMLDWNAVGEIDFEKF 84

  Fly    70 LTMMARKMKDTDSEE------EIREAFRVFDKDGNGFISAA--ELRHVMTNLGEKLTDEEVDEMI 126
            ..::...:...:..|      ..|..|.:.|..|:..|.|.  |:...:.|:.:    :|:.::.
Human    85 YMLVCMLLAHQNHLEGQFMYRHSRPVFDLLDLKGDLRIGAKNFEMYRFLFNIQK----QELKDLF 145

  Fly   127 READIDGDGQVNYEEF 142
            |:.||.||.::||:||
Human   146 RDFDITGDNRLNYQEF 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CamNP_001246276.1 PTZ00184 1..149 CDD:185504 32/146 (22%)
EFCAB9NP_001164654.1 EF-hand_7 108..162 CDD:290234 18/58 (31%)
EFh 110..161 CDD:298682 15/54 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 177..197
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.