DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cam and cdc4

DIOPT Version :10

Sequence 1:NP_523710.1 Gene:Cam / 36329 FlyBaseID:FBgn0000253 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_594947.1 Gene:cdc4 / 2541699 PomBaseID:SPAP8A3.08 Length:141 Species:Schizosaccharomyces pombe


Alignment Length:136 Identity:57/136 - (41%)
Similarity:85/136 - (62%) Gaps:7/136 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK- 76
            :|:||||||:.|.|.|....:|.::|:.|||||.||    |.|:::.....:|..:||.::.|. 
pombe     8 YKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAE----ITEIESTLPAEVDMEQFLQVLNRPN 68

  Fly    77 -MKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
             .......||..:.|:|||||..|.|...|||:|:|:|||||::||:||:::...:. ||.|||.
pombe    69 GFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNYH 132

  Fly   141 EFVTMM 146
            :||.|:
pombe   133 DFVQMI 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CamNP_523710.1 PTZ00184 1..149 CDD:185504 57/136 (42%)
cdc4NP_594947.1 PTZ00184 8..141 CDD:185504 57/136 (42%)

Return to query results.
Submit another query.