DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cam and cal-7

DIOPT Version :9

Sequence 1:NP_001246276.1 Gene:Cam / 36329 FlyBaseID:FBgn0000253 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_505510.2 Gene:cal-7 / 185545 WormBaseID:WBGene00009585 Length:179 Species:Caenorhabditis elegans


Alignment Length:144 Identity:45/144 - (31%)
Similarity:80/144 - (55%) Gaps:13/144 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF-----LTMMA 74
            :.|.:||:|.||.|.|.::..|:||.|.||::.||| :::|..|..||.:.|.:.     |.:..
 Worm    39 DVFKMFDEDSDGLIETDDVSHVLRSFGLNPSQTELQ-LVSEQTAKKNGRVSFDDLLPRVVLAIQN 102

  Fly    75 RKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 139
            .:.|| |:.::|..||:|.  ..|.::....|..::|::||.||.:||.:.:....|..:|.:::
 Worm   103 EEWKD-DTPKQIHAAFQVI--TSNNYVQKDTLLQLLTSIGEPLTPQEVKQFLNHVSIRANGDIDW 164

  Fly   140 EEFV----TMMTSK 149
            ..:|    .|:||:
 Worm   165 VSYVKDTCEMITSR 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CamNP_001246276.1 PTZ00184 1..149 CDD:185504 44/142 (31%)
cal-7NP_505510.2 PTZ00184 41..169 CDD:185504 41/131 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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