DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cam and cal-4

DIOPT Version :10

Sequence 1:NP_523710.1 Gene:Cam / 36329 FlyBaseID:FBgn0000253 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_001379504.1 Gene:cal-4 / 177945 WormBaseID:WBGene00000288 Length:236 Species:Caenorhabditis elegans


Alignment Length:145 Identity:85/145 - (58%)
Similarity:108/145 - (74%) Gaps:1/145 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
            ||:.|.|::.||.:||.||||||:.|:..||||..||.||.||||.||.:|:||.|.||||.|||
 Worm    68 ADEFTPEELQEFAQAFKLFDKDGNNTMNIKELGEAMRMLGLNPTEEELLNMVNEYDVDGNGKIDF 132

  Fly    67 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADI 131
            .||..||....|:|| :|.||.||:||||||||:|:|.|.:|.||.:||:.::|||||:|||.|.
 Worm   133 GEFCKMMKEMNKETD-QELIRLAFKVFDKDGNGYITAQEFKHFMTTMGERFSEEEVDEIIREVDK 196

  Fly   132 DGDGQVNYEEFVTMM 146
            |||.|::.:|||.|:
 Worm   197 DGDEQIDLDEFVNMV 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CamNP_523710.1 PTZ00184 1..149 CDD:185504 85/145 (59%)
cal-4NP_001379504.1 PTZ00184 68..211 CDD:185504 84/143 (59%)

Return to query results.
Submit another query.