DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cam and sqh

DIOPT Version :10

Sequence 1:NP_523710.1 Gene:Cam / 36329 FlyBaseID:FBgn0000253 Length:149 Species:Drosophila melanogaster
Sequence 2:XP_309109.2 Gene:sqh / 1270410 VectorBaseID:AGAMI1_002024 Length:183 Species:Anopheles gambiae


Alignment Length:146 Identity:63/146 - (43%)
Similarity:92/146 - (63%) Gaps:8/146 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
            |.||   .|||||||||::.|::.||.|...:|..::.|||:||||..|:.|:||..    |.|:
Mosquito    27 MFDQ---AQIAEFKEAFNMIDQNRDGFIEKDDLHDMLASLGKNPTEEYLEGMMNEAP----GPIN 84

  Fly    66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 130
            |..|||:...:::.||.||.|:.||..||::..|.|:...||.::|.:|::.|||:||||.|||.
Mosquito    85 FTMFLTLFGERLQGTDPEEVIKNAFGCFDEENTGVINEDRLRELLTTMGDRFTDEDVDEMFREAP 149

  Fly   131 IDGDGQVNYEEFVTMM 146
            |. :...:|.||..::
Mosquito   150 IK-NSLFDYIEFTRIL 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CamNP_523710.1 PTZ00184 1..149 CDD:185504 63/146 (43%)
sqhXP_309109.2 PTZ00184 27..164 CDD:185504 63/144 (44%)

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