DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cam and CIB3

DIOPT Version :9

Sequence 1:NP_001246276.1 Gene:Cam / 36329 FlyBaseID:FBgn0000253 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_473454.1 Gene:CIB3 / 117286 HGNCID:24580 Length:187 Species:Homo sapiens


Alignment Length:120 Identity:36/120 - (30%)
Similarity:63/120 - (52%) Gaps:8/120 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 ELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKD 96
            ||...|..|..||....:..:.:| |.||:.|:|  .||.|.:...:....:.:...||:::|.:
Human    57 ELIGSMPELKDNPFRQRIAQVFSE-DGDGHMTLD--NFLDMFSVMSEMAPRDLKAYYAFKIYDFN 118

  Fly    97 GNGFISAAELRHVMTNLGE-KLTDEEV----DEMIREADIDGDGQVNYEEFVTMM 146
            .:.:|.|.:|...:|.|.. .|:.|||    ::::.|||.|.||:::.|:|..|:
Human   119 NDDYICAWDLEQTVTKLTRGGLSAEEVSLVCEKVLDEADGDHDGRLSLEDFQNMI 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CamNP_001246276.1 PTZ00184 1..149 CDD:185504 36/120 (30%)
CIB3NP_473454.1 FRQ1 20..178 CDD:227455 36/120 (30%)
EFh 111..173 CDD:238008 20/61 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.