DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS11 and Rps11

DIOPT Version :9

Sequence 1:NP_725114.1 Gene:RpS11 / 36321 FlyBaseID:FBgn0033699 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_112372.1 Gene:Rps11 / 81774 RGDID:621026 Length:158 Species:Rattus norvegicus


Alignment Length:158 Identity:113/158 - (71%)
Similarity:134/158 - (84%) Gaps:3/158 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAD-QNERAFQKQFGVNLNRK-VKPGIT-KKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGD 62
            ||| |.|||:|||..:..|:| |..|.| |:||.|..:::|||||||:|||:|||||||||:||:
  Rat     1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGN 65

  Fly    63 VRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGE 127
            |.||||||:|||.|.||||||||||||||::|||:||||||:|||||.||.||||:.|||||:||
  Rat    66 VSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGE 130

  Fly   128 CRPLSKTVRFNVLKVSKGQGAKKSFKKY 155
            |||||||||||||||:|..|.||.|:|:
  Rat   131 CRPLSKTVRFNVLKVTKAAGTKKQFQKF 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS11NP_725114.1 PTZ00241 1..155 CDD:240326 112/156 (72%)
Rps11NP_112372.1 PTZ00241 1..158 CDD:240326 112/156 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166349355
Domainoid 1 1.000 127 1.000 Domainoid score I5265
eggNOG 1 0.900 - - E1_COG0186
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H88443
Inparanoid 1 1.050 220 1.000 Inparanoid score I3470
OMA 1 1.010 - - QHG54030
OrthoDB 1 1.010 - - D1325168at2759
OrthoFinder 1 1.000 - - FOG0000911
OrthoInspector 1 1.000 - - otm46069
orthoMCL 1 0.900 - - OOG6_100208
Panther 1 1.100 - - LDO PTHR10744
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1342
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.810

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