DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpS11 and Mrps17

DIOPT Version :10

Sequence 1:NP_725114.1 Gene:RpS11 / 36321 FlyBaseID:FBgn0033699 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_079726.1 Gene:Mrps17 / 66258 MGIID:1913508 Length:120 Species:Mus musculus


Alignment Length:83 Identity:23/83 - (27%)
Similarity:39/83 - (46%) Gaps:20/83 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 GRIL-TGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVH-----CSPVFRDVEHGDIVTI 125
            |::: |.:::.||::.|.::...||   .||  |.|| :....|     ||.       ||||.:
Mouse    15 GKVIGTAMIKTAKVRATRLVLDPYL---LKY--FNKR-KTYFAHDALQQCSV-------GDIVLL 66

  Fly   126 GECR-PLSKTVRFNVLKV 142
            .... |.||.|:..:.::
Mouse    67 RALPVPRSKHVKHELAEI 84

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS11NP_725114.1 PTZ00241 1..155 CDD:240326 23/83 (28%)
Mrps17NP_079726.1 Ribosomal_uS17 11..84 CDD:466775 23/81 (28%)

Return to query results.
Submit another query.