DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpS11 and Rps11l1

DIOPT Version :10

Sequence 1:NP_725114.1 Gene:RpS11 / 36321 FlyBaseID:FBgn0033699 Length:155 Species:Drosophila melanogaster
Sequence 2:XP_575471.1 Gene:Rps11l1 / 500119 RGDID:1563352 Length:158 Species:Rattus norvegicus


Alignment Length:158 Identity:86/158 - (54%)
Similarity:118/158 - (74%) Gaps:3/158 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAD-QNERAFQKQFGVNLNRK-VKPGIT-KKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGD 62
            ||| ..|||:|.|..::.|:| |..|.| |:||.|..:::||||||.:||.:|||||||||:.|:
  Rat     1 MADTHTERAYQNQPTISQNKKHVLLGETGKEKLPRYHKNIGLGFKTTKEASEGTYIDKKCPFPGN 65

  Fly    63 VRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGE 127
            |.|:||:|..||:|.|:|||:.||:|.||::|||:||||:.:|..|..||.||.|:..||||:||
  Rat    66 VSIQGRMLFVVVKKMKLQRTVAIRQDCLHYIRKYNRFEKQPKNTPVRLSPCFRVVQINDIVTVGE 130

  Fly   128 CRPLSKTVRFNVLKVSKGQGAKKSFKKY 155
            ||||||||.:::.||:...|.:|.|:|:
  Rat   131 CRPLSKTVFYSMCKVTTAAGTRKQFQKF 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS11NP_725114.1 PTZ00241 1..155 CDD:240326 85/156 (54%)
Rps11l1XP_575471.1 PTZ00241 1..158 CDD:240326 85/156 (54%)

Return to query results.
Submit another query.