DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp6t3 and cyp4b1.2

DIOPT Version :9

Sequence 1:NP_610745.1 Gene:Cyp6t3 / 36318 FlyBaseID:FBgn0033697 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001017348.1 Gene:cyp4b1.2 / 550102 XenbaseID:XB-GENE-963387 Length:515 Species:Xenopus tropicalis


Alignment Length:576 Identity:132/576 - (22%)
Similarity:214/576 - (37%) Gaps:163/576 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLLIWLLLLTIVTLNFWLRHKYDYFRSRG-----IPHL-PPSSWSPMGNLGQLLFLRISFGDLFR 59
            :|.:.||||....|         |.|.|.     :|.. ||:.|. .|::.|   .|....||.|
 Frog    27 LLCVVLLLLKAYAL---------YSRGRRFAAALVPFPGPPAHWL-YGHVNQ---FRRDGKDLDR 78

  Fly    60 QL-----YADPRNGQAKIVGFFIFQTPALMVRDPELIRQVL------IKNFNNFLNRFESADAGD 113
            .:     |.   |.....:|.| |.|  |::.||:..:.|.      .....|||         .
 Frog    79 LMVWVNKYP---NAFPLWIGKF-FGT--LIITDPDYAKVVFGRSDPKTSTGYNFL---------V 128

  Fly   114 PMGALTLPLAKYHHWKESRQCMSQLFTSGRMRDVM--YSQMLD-----VASDLEQYLNR------ 165
            |.....|.:...:.|.:.|    :|.|.|...||:  |..::.     :..:|:.|.|:      
 Frog   129 PWIGKGLLILSGNTWFQHR----RLITPGFHYDVLKPYVSLISDSTKIMLDELDVYSNKDESVEL 189

  Fly   166 --------------------------KLGDRLERVLPLGRMCQ--LYTTDVTGNLFYSLNVGGLR 202
                                      |..|.::.|..|..:.|  :.|.....||.|.|:..|.|
 Frog   190 FQHVSLMTLDSIMKCAFSYHSNCQTDKDNDYIQAVYDLSWLTQQRIRTFPYHSNLIYFLSPHGFR 254

  Fly   203 ----------------RGRSELITKTKELFNTNPRKVLDFMSVFFLPKWTGVLKPKVFTEDYARY 251
                            ..|.:|:...:||.....::.|||:.:....|                 
 Frog   255 FRKACRIVHLHTDKVIGQRKKLLESKEELEKVQKKRHLDFLDILLCSK----------------- 302

  Fly   252 MRHLVDDHHEPTKGDLINQLQHFQLSRSSNHYSQHPDFVASQAGIILLAGFETSSALMGFTLYEL 316
                 |::.:..                     .|.| :.::....:..|.:|:|:.:.:.||.:
 Frog   303 -----DENGQGL---------------------SHED-LRAEVDTFMFEGHDTTSSGISWILYCM 340

  Fly   317 AKAPDIQERLRSELREAFISTATLSYDTLMTLPYLKMVCLEALRLYPAAAFVNRECTSSAS--EG 379
            |..|:.|::.|.|:.||.....|:.:|.|..:||..|...|:|||||....|:||.....:  :|
 Frog   341 ATHPEHQQKCREEISEALGERQTMEWDDLNRMPYTTMCIKESLRLYPPVPSVSRELAKPITFHDG 405

  Fly   380 FSLQPHVDFIVPPGMPAYISILGLHRDERFWPEPCVFDPERFGPERSRHIHPMTYIPFGAGPHGC 444
            .||        |.||...:.|..:||:...|.:|.:|||.||.||.|...|...::||.|||..|
 Frog   406 RSL--------PAGMLVSLQIYAIHRNPNVWKDPEIFDPLRFSPENSSKRHSHAFVPFAAGPRNC 462

  Fly   445 IGSRLGVLQLKLGIVHILKQYWVETCERTVSEIRFNPKSFMLESENEIYLRFCRSS 500
            ||....:.::|:.:...||::.:..   .:|:........:|.|:|.|::...::|
 Frog   463 IGQNFAMNEMKVAVALTLKRFELSP---DLSKPPLKQPQLVLRSKNGIHVYLKKAS 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6t3NP_610745.1 p450 34..486 CDD:299894 117/521 (22%)
cyp4b1.2NP_001017348.1 p450 55..508 CDD:278495 120/530 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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