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Protein Alignment SmF and SMX2
DIOPT Version :10
| Sequence 1: | NP_523708.2 |
Gene: | SmF / 36314 |
FlyBaseID: | FBgn0000426 |
Length: | 88 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_116636.1 |
Gene: | SMX2 / 850528 |
SGDID: | S000002965 |
Length: | 77 |
Species: | Saccharomyces cerevisiae |
| Alignment Length: | 72 |
Identity: | 18/72 - (25%) |
| Similarity: | 36/72 - (50%) |
Gaps: | 5/72 - (6%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 11 PFLNGLTGKPVLVKLKWGQEYKGFLVSVDGYMNMQLANTEEVIEGSVTGN---LG-EVLIRCNNV 71
|.|.....|.:|:.:...::..|.|...|.::|:.|.:..| |.|....| || :.:||.|::
Yeast 5 PELKKYMDKKILLNINGSRKVAGILRGYDIFLNVVLDDAME-INGEDPANNHQLGLQTVIRGNSI 68
Fly 72 LYIKGME 78
:.::.::
Yeast 69 ISLEALD 75
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| SmF | NP_523708.2 |
Sm_F |
8..76 |
CDD:212469 |
18/68 (26%) |
| SMX2 | NP_116636.1 |
Sm_G |
3..75 |
CDD:212466 |
18/70 (26%) |
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