Protein Alignment SmF and LSM6B

DIOPT Version :9

• Sequence 1: NP_523708.2
• Gene: SmF / 36314
• FlyBaseID: FBgn0000426
• Length: 88
• Species: Drosophila melanogaster
• Sequence 2: NP_001078052.1
• Gene: LSM6B / 818985
• AraportID: AT2G43810
• Length: 91
• Species: Arabidopsis thaliana
• Alignment Length: 82
• Identity: 35/82 - (42%)
• Similarity: 48/82 - (58%)
• Gaps: 3/82 - (3%)

  Fly     2 SAGMPINPKPFLNGLTGKPVLVKLKWGQEYKGFLVSVDGYMNMQLANTEEVIEGSVTGNLGEVLI 66
            ::|....|..||..:.||||:|||..|.:|:|.|..:|||||:.:..|||.:.|.:....|:..:
plant     8 ASGTTKTPADFLKSIRGKPVVVKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNGQLKNTYGDAFV 72

  Fly    67 RCNNVLYI---KGMEDD 80
            |.||||||   ||...|
plant    73 RGNNVLYISTTKGTLSD 89

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmF	NP_523708.2	Sm_F	8..76	CDD:212469	31/70 (44%)
LSM6B	NP_001078052.1	LSm6	14..81	CDD:212473	30/66 (45%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000850
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910