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Protein Alignment SmF and Snrpg
DIOPT Version :10
| Sequence 1: | NP_523708.2 |
Gene: | SmF / 36314 |
FlyBaseID: | FBgn0000426 |
Length: | 88 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001128557.1 |
Gene: | Snrpg / 681031 |
RGDID: | 1584713 |
Length: | 76 |
Species: | Rattus norvegicus |
| Alignment Length: | 81 |
Identity: | 24/81 - (29%) |
| Similarity: | 45/81 - (55%) |
Gaps: | 10/81 - (12%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MSAGMPINPKPFLNGLTGKPVLVKLKWGQEYKGFLVSVDGYMNMQLANTEEVIEGSVTG---NLG 62
||...|...|.|:: |.:.:||..|:..:|.|...|.:||:.: :|.:|.:.:| |:|
Rat 1 MSKAHPPELKKFMD----KKLSLKLNGGRHVQGILRGFDPFMNLVI---DECVEMATSGQQNNIG 58
Fly 63 EVLIRCNNVLYIKGME 78
.|:||.|:::.::.:|
Rat 59 MVVIRGNSIIMLEALE 74
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| SmF | NP_523708.2 |
Sm_F |
8..76 |
CDD:212469 |
20/70 (29%) |
| Snrpg | NP_001128557.1 |
Sm_G |
5..74 |
CDD:212466 |
21/75 (28%) |
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