Protein Alignment SmF and Snrpf

DIOPT Version :9

• Sequence 1: NP_523708.2
• Gene: SmF / 36314
• FlyBaseID: FBgn0000426
• Length: 88
• Species: Drosophila melanogaster
• Sequence 2: NP_001119563.1
• Gene: Snrpf / 680737
• RGDID: 1588229
• Length: 86
• Species: Rattus norvegicus
• Alignment Length: 84
• Identity: 66/84 - (78%)
• Similarity: 82/84 - (97%)
• Gaps: 0/84 - (0%)

  Fly     5 MPINPKPFLNGLTGKPVLVKLKWGQEYKGFLVSVDGYMNMQLANTEEVIEGSVTGNLGEVLIRCN 69
            :|:||||||||||||||:||||||.||||:|||||||||||||||||.|:|:::|:|||||||||
  Rat     3 LPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRCN 67

  Fly    70 NVLYIKGMEDDDEEGEMRD 88
            |||||:|:|:::|:||||:
  Rat    68 NVLYIRGVEEEEEDGEMRE 86

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmF	NP_523708.2	Sm_F	8..76	CDD:212469	58/67 (87%)
Snrpf	NP_001119563.1	Sm_F	6..74	CDD:212469	58/67 (87%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166350904
Domainoid	1	1.000	118	1.000	Domainoid score	I5729
eggNOG	1	0.900	-	-		E1_KOG3482
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	151	1.000	Inparanoid score	I4280
OMA	1	1.010	-	-		QHG53618
OrthoDB	1	1.010	-	-		D1600677at2759
OrthoFinder	1	1.000	-	-		FOG0000850
OrthoInspector	1	1.000	-	-		oto98427
orthoMCL	1	0.900	-	-		OOG6_102196
Panther	1	1.100	-	-	LDO	PTHR11021
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X2385
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	15	14.770