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Protein Alignment SmF and SNRPG
DIOPT Version :10
| Sequence 1: | NP_523708.2 |
Gene: | SmF / 36314 |
FlyBaseID: | FBgn0000426 |
Length: | 88 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001304094.1 |
Gene: | SNRPG / 6637 |
HGNCID: | 11163 |
Length: | 96 |
Species: | Homo sapiens |
| Alignment Length: | 89 |
Identity: | 23/89 - (25%) |
| Similarity: | 45/89 - (50%) |
Gaps: | 10/89 - (11%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MSAGMPINPKPFLNGLTGKPVLVKLKWGQEYKGFLVSVDGYMNMQLANTEEVIEGSVTG---NLG 62
||...|...|.|:: |.:.:||..|:..:|.|...|.:||:.: :|.:|.:.:| |:|
Human 1 MSKAHPPELKKFMD----KKLSLKLNGGRHVQGILRGFDPFMNLVI---DECVEMATSGQQNNIG 58
Fly 63 EVLIRCNNVLYIKGMEDDDEEGEM 86
.|....|..:..|.::..:::|::
Human 59 MVDNIPNKAVSPKFLKKVNQKGQL 82
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| SmF | NP_523708.2 |
Sm_F |
8..76 |
CDD:212469 |
18/70 (26%) |
| SNRPG | NP_001304094.1 |
Sm_G |
5..>60 |
CDD:212466 |
17/61 (28%) |
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