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Protein Alignment SmF and LSM8
DIOPT Version :10
| Sequence 1: | NP_523708.2 |
Gene: | SmF / 36314 |
FlyBaseID: | FBgn0000426 |
Length: | 88 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_057284.1 |
Gene: | LSM8 / 51691 |
HGNCID: | 20471 |
Length: | 96 |
Species: | Homo sapiens |
| Alignment Length: | 83 |
Identity: | 20/83 - (24%) |
| Similarity: | 35/83 - (42%) |
Gaps: | 8/83 - (9%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 13 LNGLTGKPVLVKLKWGQEYKGFLVSVDGYMNMQLANTEEVIEGSVTG----NLGEVLIRCNNVLY 73
|.....:.|.|....|:...|.|...|..:|:.|..:.|.:..|..| .||..::|.:||..
Human 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAV 69
Fly 74 IKGMEDDDEE----GEMR 87
|..::::.:. |.:|
Human 70 IGEIDEETDSALDLGNIR 87
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| SmF | NP_523708.2 |
Sm_F |
8..76 |
CDD:212469 |
18/66 (27%) |
| LSM8 | NP_057284.1 |
LSm8 |
3..92 |
CDD:212474 |
20/83 (24%) |
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