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Protein Alignment SmF and Lsm6
DIOPT Version :10
| Sequence 1: | NP_523708.2 |
Gene: | SmF / 36314 |
FlyBaseID: | FBgn0000426 |
Length: | 88 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001119557.1 |
Gene: | Lsm6 / 498934 |
RGDID: | 1561937 |
Length: | 80 |
Species: | Rattus norvegicus |
| Alignment Length: | 66 |
Identity: | 32/66 - (48%) |
| Similarity: | 42/66 - (63%) |
Gaps: | 0/66 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 9 PKPFLNGLTGKPVLVKLKWGQEYKGFLVSVDGYMNMQLANTEEVIEGSVTGNLGEVLIRCNNVLY 73
|..||..:.|:||:|||..|.:|:|.|..:|||||:.|..|||.:.|.:....|:..||.|||||
Rat 8 PSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYGDAFIRGNNVLY 72
Fly 74 I 74
|
Rat 73 I 73
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| SmF | NP_523708.2 |
Sm_F |
8..76 |
CDD:212469 |
32/66 (48%) |
| Lsm6 | NP_001119557.1 |
LSm6 |
7..74 |
CDD:212473 |
32/66 (48%) |
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