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Protein Alignment SmF and snrpf
DIOPT Version :10
| Sequence 1: | NP_523708.2 |
Gene: | SmF / 36314 |
FlyBaseID: | FBgn0000426 |
Length: | 88 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001005083.1 |
Gene: | snrpf / 448659 |
XenbaseID: | XB-GENE-1017067 |
Length: | 86 |
Species: | Xenopus tropicalis |
| Alignment Length: | 84 |
Identity: | 66/84 - (78%) |
| Similarity: | 82/84 - (97%) |
Gaps: | 0/84 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 5 MPINPKPFLNGLTGKPVLVKLKWGQEYKGFLVSVDGYMNMQLANTEEVIEGSVTGNLGEVLIRCN 69
:|:||||||||||||||:||||||.||||:|||||||||||||||||.|:|:::|:|||||||||
Frog 3 LPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRCN 67
Fly 70 NVLYIKGMEDDDEEGEMRD 88
|||||:|:|:::|:||||:
Frog 68 NVLYIRGVEEEEEDGEMRE 86
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| SmF | NP_523708.2 |
Sm_F |
8..76 |
CDD:212469 |
58/67 (87%) |
| snrpf | NP_001005083.1 |
Sm_F |
6..74 |
CDD:212469 |
58/67 (87%) |
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