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Protein Alignment SmF and snrpg
DIOPT Version :10
| Sequence 1: | NP_523708.2 |
Gene: | SmF / 36314 |
FlyBaseID: | FBgn0000426 |
Length: | 88 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001004660.2 |
Gene: | snrpg / 447922 |
ZFINID: | ZDB-GENE-040912-105 |
Length: | 76 |
Species: | Danio rerio |
| Alignment Length: | 78 |
Identity: | 23/78 - (29%) |
| Similarity: | 42/78 - (53%) |
Gaps: | 4/78 - (5%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MSAGMPINPKPFLNGLTGKPVLVKLKWGQEYKGFLVSVDGYMNMQLANTEEVIEGSVTGNLGEVL 65
||...|...|.|:: |.:.:||..|:..:|.|...|.:||:.:.:|.|:..|.....:|.|:
Zfish 1 MSKAHPPELKKFMD----KKLSLKLNGGRHVQGILRGFDPFMNLVVDDTIEMAPGGQMNTIGMVV 61
Fly 66 IRCNNVLYIKGME 78
||.|:::.::.:|
Zfish 62 IRGNSIIMLEALE 74
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| SmF | NP_523708.2 |
Sm_F |
8..76 |
CDD:212469 |
19/67 (28%) |
| snrpg | NP_001004660.2 |
Sm_G |
5..74 |
CDD:212466 |
20/72 (28%) |
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