Protein Alignment SmF and snrpf

DIOPT Version :9

• Sequence 1: NP_523708.2
• Gene: SmF / 36314
• FlyBaseID: FBgn0000426
• Length: 88
• Species: Drosophila melanogaster
• Sequence 2: NP_001003881.1
• Gene: snrpf / 445404
• ZFINID: ZDB-GENE-040930-9
• Length: 86
• Species: Danio rerio
• Alignment Length: 84
• Identity: 65/84 - (77%)
• Similarity: 81/84 - (96%)
• Gaps: 0/84 - (0%)

  Fly     5 MPINPKPFLNGLTGKPVLVKLKWGQEYKGFLVSVDGYMNMQLANTEEVIEGSVTGNLGEVLIRCN 69
            :|:||||||||||||||:||||||.||||:|||||||||||||||||.::|::.|:|||||||||
Zfish     3 LPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYVDGALAGHLGEVLIRCN 67

  Fly    70 NVLYIKGMEDDDEEGEMRD 88
            |||||:|:|:::|:||||:
Zfish    68 NVLYIRGVEEEEEDGEMRE 86

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmF	NP_523708.2	Sm_F	8..76	CDD:212469	57/67 (85%)
snrpf	NP_001003881.1	Sm_F	6..74	CDD:212469	57/67 (85%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170592590
Domainoid	1	1.000	117	1.000	Domainoid score	I5870
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	151	1.000	Inparanoid score	I4333
OMA	1	1.010	-	-		QHG53618
OrthoDB	1	1.010	-	-		D1600677at2759
OrthoFinder	1	1.000	-	-		FOG0000850
OrthoInspector	1	1.000	-	-		otm24499
orthoMCL	1	0.900	-	-		OOG6_102196
Panther	1	1.100	-	-	LDO	PTHR11021
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X2385
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	12	11.910