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Protein Alignment SmF and LSm1
DIOPT Version :10
| Sequence 1: | NP_523708.2 |
Gene: | SmF / 36314 |
FlyBaseID: | FBgn0000426 |
Length: | 88 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_611559.1 |
Gene: | LSm1 / 37413 |
FlyBaseID: | FBgn0261067 |
Length: | 137 |
Species: | Drosophila melanogaster |
| Alignment Length: | 83 |
Identity: | 25/83 - (30%) |
| Similarity: | 43/83 - (51%) |
Gaps: | 12/83 - (14%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 13 LNGLTG---------KPVLVKLKWGQEYKGFLVSVDGYMNMQLANT-EEVIEGSVTGNL--GEVL 65
||.|.| |.::|.|:.|:...|:|.|||.:.|:.|..| |.:..|:..|:: |..:
Fly 4 LNPLAGTAHLLEEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFI 68
Fly 66 IRCNNVLYIKGMEDDDEE 83
||..||:.:..::.:.|:
Fly 69 IRGENVVLLGEIDREKEQ 86
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| SmF | NP_523708.2 |
Sm_F |
8..76 |
CDD:212469 |
24/74 (32%) |
| LSm1 | NP_611559.1 |
LSm1 |
7..80 |
CDD:212475 |
22/72 (31%) |
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