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Protein Alignment SmF and smf1
DIOPT Version :9
Sequence 1: | NP_523708.2 |
Gene: | SmF / 36314 |
FlyBaseID: | FBgn0000426 |
Length: | 88 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_596101.1 |
Gene: | smf1 / 2540330 |
PomBaseID: | SPBC3E7.14 |
Length: | 78 |
Species: | Schizosaccharomyces pombe |
Alignment Length: | 70 |
Identity: | 50/70 - (71%) |
Similarity: | 61/70 - (87%) |
Gaps: | 0/70 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 MPINPKPFLNGLTGKPVLVKLKWGQEYKGFLVSVDGYMNMQLANTEEVIEGSVTGNLGEVLIRCN 69
:|:||||||.||.||||||:|||||||||.|.|||.|||:||.|.||:::|..||:|||:|||||
pombe 4 VPVNPKPFLQGLIGKPVLVRLKWGQEYKGTLQSVDSYMNLQLLNAEELVDGVKTGDLGEILIRCN 68
Fly 70 NVLYI 74
|||::
pombe 69 NVLWV 73
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
SmF | NP_523708.2 |
Sm_F |
8..76 |
CDD:212469 |
49/67 (73%) |
smf1 | NP_596101.1 |
Sm_F |
7..75 |
CDD:212469 |
49/67 (73%) |
Information from Original Tools:
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