powered by:
Protein Alignment SmF and lsm-7
DIOPT Version :10
| Sequence 1: | NP_523708.2 |
Gene: | SmF / 36314 |
FlyBaseID: | FBgn0000426 |
Length: | 88 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_502034.1 |
Gene: | lsm-7 / 177988 |
WormBaseID: | WBGene00003081 |
Length: | 104 |
Species: | Caenorhabditis elegans |
| Alignment Length: | 71 |
Identity: | 19/71 - (26%) |
| Similarity: | 30/71 - (42%) |
Gaps: | 11/71 - (15%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 19 KPVLVKLKWGQEYKGFLVSVDGYMNMQLANTEEVIE--------GSVTGNLGEVLIRCNNVLYIK 75
|.:.||.:.|:|..|.|...|..:||.|.:..|.:. |..|..||.::.|...:..:.
Worm 22 KEIRVKFQGGREASGVLRGFDQLLNMVLDDCREYLRDPQNPSVVGDETRQLGLIVARGTAITVVS 86
Fly 76 ---GME 78
|:|
Worm 87 PADGLE 92
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| SmF | NP_523708.2 |
Sm_F |
8..76 |
CDD:212469 |
17/67 (25%) |
| lsm-7 | NP_502034.1 |
LSm7 |
10..98 |
CDD:212476 |
19/71 (27%) |
Return to query results.
Submit another query.
