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Protein Alignment SmF and snr-5
DIOPT Version :9
Sequence 1: | NP_523708.2 |
Gene: | SmF / 36314 |
FlyBaseID: | FBgn0000426 |
Length: | 88 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_498708.1 |
Gene: | snr-5 / 176103 |
WormBaseID: | WBGene00004918 |
Length: | 85 |
Species: | Caenorhabditis elegans |
Alignment Length: | 82 |
Identity: | 55/82 - (67%) |
Similarity: | 68/82 - (82%) |
Gaps: | 0/82 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSAGMPINPKPFLNGLTGKPVLVKLKWGQEYKGFLVSVDGYMNMQLANTEEVIEGSVTGNLGEVL 65
|||..|:|||||||.||||.|:.|||||.||||.||:||.|||:|||:.||.|:|:..|||||:|
Worm 1 MSAVQPVNPKPFLNSLTGKFVVCKLKWGMEYKGVLVAVDSYMNLQLAHAEEYIDGNSQGNLGEIL 65
Fly 66 IRCNNVLYIKGMEDDDE 82
||||||||:.|::.::|
Worm 66 IRCNNVLYVGGVDGENE 82
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
SmF | NP_523708.2 |
Sm_F |
8..76 |
CDD:212469 |
49/67 (73%) |
snr-5 | NP_498708.1 |
Sm_F |
8..76 |
CDD:212469 |
49/67 (73%) |
Information from Original Tools:
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