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Protein Alignment SmF and LSm7
DIOPT Version :10
| Sequence 1: | NP_523708.2 |
Gene: | SmF / 36314 |
FlyBaseID: | FBgn0000426 |
Length: | 88 |
Species: | Drosophila melanogaster |
| Sequence 2: | XP_317337.4 |
Gene: | LSm7 / 1277833 |
VectorBaseID: | AGAMI1_012900 |
Length: | 126 |
Species: | Anopheles gambiae |
| Alignment Length: | 70 |
Identity: | 23/70 - (32%) |
| Similarity: | 32/70 - (45%) |
Gaps: | 10/70 - (14%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 19 KPVLVKLKWGQEYKGFLVSVDGYMNMQLANTEEVIE-------GSVTGNLGEVLIRCNNVLYI-- 74
|.:.||...|:|..|.|...|..:|:.|.||.|.:. ...|.:||.|:.|..:|:.|
Mosquito 46 KTIRVKFAGGREAAGVLKGYDPLLNLVLDNTIEFLRDPDDYKLADDTRHLGLVVCRGTSVVLICP 110
Fly 75 -KGME 78
.|||
Mosquito 111 QDGME 115
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| SmF | NP_523708.2 |
Sm_F |
8..76 |
CDD:212469 |
20/66 (30%) |
| LSm7 | XP_317337.4 |
None |
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