Protein Alignment SmF and LOC108352309

DIOPT Version :9

• Sequence 1: NP_523708.2
• Gene: SmF / 36314
• FlyBaseID: FBgn0000426
• Length: 88
• Species: Drosophila melanogaster
• Sequence 2: XP_038944727.1
• Gene: LOC108352309 / 108352309
• RGDID: 11459335
• Length: 83
• Species: Rattus norvegicus
• Alignment Length: 84
• Identity: 53/84 - (63%)
• Similarity: 67/84 - (79%)
• Gaps: 3/84 - (3%)

  Fly     5 MPINPKPFLNGLTGKPVLVKLKWGQEYKGFLVSVDGYMNMQLANTEEVIEGSVTGNLGEVLIRCN 69
            :|:||||||||||||||:|:||.|.|||.:||||||||:.||||.:....|..   |||.|.|||
  Rat     3 LPLNPKPFLNGLTGKPVMVRLKRGTEYKDYLVSVDGYMDTQLANQKNTEMGHC---LGEALKRCN 64

  Fly    70 NVLYIKGMEDDDEEGEMRD 88
            ||.||:|:|:::|:||||:
  Rat    65 NVPYIRGVEEEEEDGEMRE 83

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmF	NP_523708.2	Sm_F	8..76	CDD:212469	45/67 (67%)
LOC108352309	XP_038944727.1	Sm_F	6..71	CDD:212469	45/67 (67%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1600677at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010