DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wash and Washc1

DIOPT Version :9

Sequence 1:NP_001286334.1 Gene:wash / 36311 FlyBaseID:FBgn0033692 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_001120862.1 Gene:Washc1 / 367328 RGDID:1310196 Length:475 Species:Rattus norvegicus


Alignment Length:521 Identity:172/521 - (33%)
Similarity:242/521 - (46%) Gaps:95/521 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 YQVAIIATDLHHEDTIIQAAQSLDCLHKTINSIFERIDARLARNGSKVEDINNRVKRAQAKIDAL 75
            |.|.:|..||..|:.|.|.|.:|..|......||.||..|:..:..:::.|..||..|||||:.:
  Rat    15 YAVPLIQPDLRREEAIQQVADALQYLQNISGDIFSRISQRVELSRRQLQAIGERVSLAQAKIEKI 79

  Fly    76 VGSKRAIQIFAPARFPASDVLAPLPATFPQVAANPLMEQQVDQLPQGTYSSHSAADQKPDDADI- 139
            .|||:||::|:.|::||.:.|....:.|.. |.:|.::::.....|   |.|...|::.....: 
  Rat    80 KGSKKAIKVFSSAKYPAPEHLQEYNSVFTG-ALDPGLQRRPRYRIQ---SKHRPLDERALQEKLK 140

  Fly   140 FFHVRGDREQESPLVAERKITNRTAGLGILPAGGVRSVPSLMRFNTNEFAYGEDLNAWKR--SLP 202
            :|.|....:.|....||.       |||.||: .:.|:.||:.|||.|       |.:|:  .|.
  Rat   141 YFPVCVSTKSEPEDEAEE-------GLGGLPS-NISSISSLLLFNTTE-------NLYKKYVFLD 190

  Fly   203 PQNARRVASQSTQL-TGEKQLAPAPHSLAHGTTKLATPAGD-LRYNPAALAAPAIDVPLDLPDLP 265
            |. |..|....|.| |.|::|..||.|::. ..:|..||.: ..|.|.....|.||||..|||||
  Rat   191 PL-AGAVTKTHTMLGTEEEKLFDAPLSISK-REQLEQPAPENYFYVPGLGQVPEIDVPSYLPDLP 253

  Fly   266 GIANDLQYEPVEEQTPIAPSQQFGDLPELPDLGLEEQDIIVQAIAAQTHIPGPVR-RKSVGQCPS 329
            |:|:||.|. .:....||||.. |.:||||              |..|.:..|.: .:..|    
  Rat   254 GVADDLMYS-ADLGPGIAPSAP-GAIPELP--------------AFHTEVAEPFQPEREDG---- 298

  Fly   330 PVTAAPPPPPPPPPPPPPPPPAQTSAIPSPPPFPTKGAVKPLSPSLAT----------------- 377
               |...|||||||||||||||.|:.:.:|.|        |:||.:.|                 
  Rat   299 ---ALLAPPPPPPPPPPPPPPAPTAVVSAPQP--------PMSPDVVTVTGKVAREEDSGSGEAH 352

  Fly   378 PLNMPQPPPATEDP---RSELMAAIRNAGGVHGGRLRSPAAAPLDVVDNSRSKAGGAVT--GDLM 437
            ..::...|....||   |:.|:.:||.|||:...:|||.....|:.......:...|.:  ||||
  Rat   353 SASVQGAPKEVVDPSSGRATLLESIRQAGGIGKAKLRSVKERKLEKKKQKEQEQVRATSQGGDLM 417

  Fly   438 ADLHNKLMLRRKGISGSQNPVEATAGNP-----LMQQLSRVIPPPVQPRKGSKSSDEHSEDDEDG 497
            :||.|||::||||||| :.|...|:..|     .|......:|||.||.         .::|||.
  Rat   418 SDLFNKLVMRRKGISG-KGPGTGTSEGPGGAFSRMSDSIPPLPPPQQPA---------GDEDEDD 472

  Fly   498 W 498
            |
  Rat   473 W 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
washNP_001286334.1 WASH_WAHD 11..301 CDD:288773 101/294 (34%)
Washc1NP_001120862.1 WHD1 1..167 51/163 (31%)
Required for WASH complex assembly. /evidence=ECO:0000250|UniProtKB:C4AMC7 1..54 15/38 (39%)
WASH_WAHD 14..296 CDD:288773 104/317 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 296..475 68/203 (33%)
VCA. /evidence=ECO:0000250|UniProtKB:C4AMC7 357..475 44/127 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346535
Domainoid 1 1.000 109 1.000 Domainoid score I6258
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H45706
Inparanoid 1 1.050 191 1.000 Inparanoid score I3791
OMA 1 1.010 - - QHG54361
OrthoDB 1 1.010 - - D386666at33208
OrthoFinder 1 1.000 - - FOG0004493
OrthoInspector 1 1.000 - - oto97484
orthoMCL 1 0.900 - - OOG6_105225
Panther 1 1.100 - - LDO PTHR23331
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3782
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.910

Return to query results.
Submit another query.