DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wash and ddl-2

DIOPT Version :9

Sequence 1:NP_001286334.1 Gene:wash / 36311 FlyBaseID:FBgn0033692 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_496847.1 Gene:ddl-2 / 190025 WormBaseID:WBGene00013000 Length:497 Species:Caenorhabditis elegans


Alignment Length:573 Identity:143/573 - (24%)
Similarity:211/573 - (36%) Gaps:161/573 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 YQVAIIATDLHHEDTIIQAAQSLDCLHKTINSIFERIDARLARNGSKVEDINNRVKRAQAKIDAL 75
            |.|.:|..|...|:||.:..|||..|.:..:.||:|::.|:.|...|.|.|:.|.:..:.|:::|
 Worm     2 YHVPLIPRDAGREETIFRINQSLQKLLRVSDEIFDRVEHRITRIHGKAEAIDRRTEVLEKKLESL 66

  Fly    76 VGSKRAIQIFAPARFPASDVLAPLPAT-------------FPQVAANPLMEQQVDQLPQG----- 122
            ..|.:.|....|.:.|.   |...|.|             ||.....|...:..|.:.:.     
 Worm    67 QESDKVITFTLPRQLPK---LPEEPPTSTSLFRINIDTEHFPGSEELPAFRRADDHVLRPCEPID 128

  Fly   123 -TYSSHSAADQKPDDADIFFHVRGDREQESPLVAERKITNRTAGLGILPAGGVRSVPSLMRFNTN 186
             ||..:     |||...:...|..:.||:.....::::           .||:|.:.........
 Worm   129 FTYELN-----KPDKFFLTSQVLKEYEQKGWERYKKRL-----------LGGLRELSRSPEHIAE 177

  Fly   187 EFAYGEDLNAW--------KRSLPPQN------ARRVASQSTQLTGEKQLAPAPHSLAHGTTKLA 237
            .|..|..:.|:        |::|...:      :.|...:..||...:||.   ...|..:|.:.
 Worm   178 LFYAGTSIPAFEGVSGDFSKKALDADDDGGTSRSGRTTDELAQLRLHEQLL---EDTALSSTLMQ 239

  Fly   238 TPAGDLRYNPAAL----------AAPAIDVPLDLPDLPGIAND-------------LQYEPVEEQ 279
            ..:.|..: |.|.          .|..:::|..||:|.|.|:|             |...|.::|
 Worm   240 EDSLDDNH-PLAFRINFNEKKKKTAKMVEMPDSLPNLKGHAHDFTLRDPEIDEDRLLDILPADDQ 303

  Fly   280 TPIA--PSQQFGDLPEL-------PDLGLEEQDIIVQAIAAQTHIPGPVRRKSVGQCPSPVTAAP 335
            .|.|  |::...|.|..       |.:.|:............|.||             |:.:.|
 Worm   304 IPEASEPTEAEADAPTTFILPPPPPPMKLDPSPQPAATPVEITEIP-------------PIISPP 355

  Fly   336 PPPPPPPPPPPPPPPAQTSAIPSPPPFPTKGAVKPLSPSLATPLNMPQPPPATEDPRSELMAAIR 400
            .||||||||||||||...||..|....|||                     :.:..||:||||||
 Worm   356 APPPPPPPPPPPPPPQTPSASSSVTFSPTK---------------------SVDGGRSDLMAAIR 399

  Fly   401 NAGGVHGGRLRSPAAAP---------------LDVVDNSRSKA----GGAVTGDLMADLHNKLML 446
            .|||....:|...|..|               |...:..|:.|    ||...||||:.|...|..
 Worm   400 AAGGAGNAKLSRIAEKPKRKGKFDGILESSALLGASETPRNSAPAPDGGGGGGDLMSALSKALDA 464

  Fly   447 RRKGISGSQNPVEATAGNPLMQQLSRVIPPPVQPRKGSKSSDEHSEDDEDGWN 499
            |||.|:|.   |||   .|..:..|.:..||             :.|||: |:
 Worm   465 RRKAINGK---VEA---QPPAKVSSTIPAPP-------------NFDDEE-WD 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
washNP_001286334.1 WASH_WAHD 11..301 CDD:288773 77/354 (22%)
ddl-2NP_496847.1 WASH_WAHD 2..>123 CDD:371812 33/123 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162650
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28KFW
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 127 1.000 Inparanoid score I3254
Isobase 1 0.950 - 0 Normalized mean entropy S7242
OMA 1 1.010 - - QHG54361
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004493
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR23331
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3513
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.930

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