DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8860 and AT4G24920

DIOPT Version :9

Sequence 1:NP_610738.1 Gene:CG8860 / 36310 FlyBaseID:FBgn0033691 Length:68 Species:Drosophila melanogaster
Sequence 2:NP_001329073.1 Gene:AT4G24920 / 828594 AraportID:AT4G24920 Length:97 Species:Arabidopsis thaliana


Alignment Length:22 Identity:8/22 - (36%)
Similarity:12/22 - (54%) Gaps:1/22 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PGRAFAKDSIRLVKRCTKPDRK 31
            |..|||..|: ::.:..|..||
plant    68 PRTAFASLSV-VISQIAKNSRK 88

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8860NP_610738.1 SecE <12..68 CDD:412402 7/20 (35%)
AT4G24920NP_001329073.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 92 1.000 Domainoid score I2580
eggNOG 1 0.900 - - E1_COG2443
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H40767
Inparanoid 1 1.050 103 1.000 Inparanoid score I2148
OMA 1 1.010 - - QHG53965
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001695
OrthoInspector 1 1.000 - - mtm1011
orthoMCL 1 0.900 - - OOG6_101625
Panther 1 1.100 - - O PTHR12309
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1245
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.830

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