DRSC/TRiP Functional Genomics Resources

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Protein Alignment EndoG and NUC1

DIOPT Version :9

Sequence 1:NP_610737.1 Gene:EndoG / 36309 FlyBaseID:FBgn0033690 Length:310 Species:Drosophila melanogaster
Sequence 2:NP_012327.1 Gene:NUC1 / 853222 SGDID:S000003744 Length:329 Species:Saccharomyces cerevisiae


Alignment Length:304 Identity:125/304 - (41%)
Similarity:175/304 - (57%) Gaps:35/304 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VGGVLALGA-TALGAFYLGTHVERERQHNGSTSGLPRLPGLPTFGTVSAASLIPAQENNV---SL 66
            :.|::.||| |.|....|..|         |.:.:...|..||          ....:|:   |.
Yeast     7 LSGLVGLGAGTGLTYLLLNKH---------SPTQIIETPYPPT----------QKPNSNIQSHSF 52

  Fly    67 TATPSRIGQIMKYGFPGLDH-VRSHSDYVLSYDRRNRVPHWVFEHLTAESVAKNDAVDRSKCDFK 130
            ...||   ...||||||..| :::..:::..|:|:.:.|:||.||:|.||:|..:| ||....||
Yeast    53 NVDPS---GFFKYGFPGPIHDLQNREEFISCYNRQTQNPYWVLEHITPESLAARNA-DRKNSFFK 113

  Fly   131 QDESIHPFFRSQNTDYRRSGYDRGHMAAAGNHRLHQKHCDETFYLSNMAPQVGQGFNRDAWNTLE 195
            :||.|...||.:..||.||||||||.|.|.:.:..|:..|:|||||||.||||:|||||.|..||
Yeast   114 EDEVIPEKFRGKLRDYFRSGYDRGHQAPAADAKFSQQAMDDTFYLSNMCPQVGEGFNRDYWAHLE 178

  Fly   196 AHVRRLTKTYSNVYVCTGPLYLPHKED-DGKSYVKYEVIG-ANTVAVPTHFYKVIVGES-----A 253
            ...|.|||.|.:|.:.|||||||.|:. |.|..|.||||| ..::||||||:|:||.|:     |
Yeast   179 YFCRGLTKKYKSVRIVTGPLYLPKKDPIDNKFRVNYEVIGNPPSIAVPTHFFKLIVAEAPTANPA 243

  Fly   254 DHKLHMESYVMPNQVISNDTPISVFQVPPESVERSAGLLFFDQI 297
            ...:.:.::|:||:.|||:|.::.|:||.:::|||.||....::
Yeast   244 REDIAVAAFVLPNEPISNETKLTDFEVPIDALERSTGLELLQKV 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EndoGNP_610737.1 NUC1 39..305 CDD:224777 116/270 (43%)
NUC 77..309 CDD:238043 109/229 (48%)
NUC1NP_012327.1 NUC1 8..308 CDD:224777 125/303 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343683
Domainoid 1 1.000 206 1.000 Domainoid score I527
eggNOG 1 0.900 - - E1_COG1864
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55823
Inparanoid 1 1.050 207 1.000 Inparanoid score I826
Isobase 1 0.950 - 0 Normalized mean entropy S973
OMA 1 1.010 - - QHG52002
OrthoFinder 1 1.000 - - FOG0003231
OrthoInspector 1 1.000 - - otm46550
orthoMCL 1 0.900 - - OOG6_102078
Panther 1 1.100 - - LDO PTHR13966
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R945
SonicParanoid 1 1.000 - - X3743
TreeFam 1 0.960 - -
1615.740

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