DRSC/TRiP Functional Genomics Resources

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Protein Alignment EndoG and pnu1

DIOPT Version :9

Sequence 1:NP_610737.1 Gene:EndoG / 36309 FlyBaseID:FBgn0033690 Length:310 Species:Drosophila melanogaster
Sequence 2:NP_594598.2 Gene:pnu1 / 2542291 PomBaseID:SPAC17C9.08 Length:322 Species:Schizosaccharomyces pombe


Alignment Length:308 Identity:118/308 - (38%)
Similarity:167/308 - (54%) Gaps:34/308 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GVLALGA----TALGAFYLGTHVERERQHNGSTSGLPRLPGL-PTFGTVSAASLIPAQENNVSLT 67
            |::|:||    |....:|.|        :.||.     :|.| |.:....:|.  .|.|:.....
pombe    10 GLIAIGAISGVTFTHFYYKG--------YQGSD-----VPDLTPRYTKFDSAG--RALESIYDFN 59

  Fly    68 ATPSRIGQIMKYGFPG-LDHVRSHSDYVLSYDRRNRVPHWVFEHLTAESVAKNDAVDRSKCDFKQ 131
            ||     :..:||.|| :...|.:..|:..:|||.|.|.:..|.:|.||:.:... :|...:|..
pombe    60 AT-----KFFQYGIPGPVADQRVNHGYMSVFDRRTRNPFYTAETITQESLNQRKG-NRRYSEFVP 118

  Fly   132 DESIHPFFRSQNTDYRRSGYDRGHMAAAGNHRLHQKHCDETFYLSNMAPQVGQGFNRDAWNTLEA 196
            |::|...|:::..|||.|||||||...|.:.:..|:..:||||||||.||||.||||:.|...|.
pombe   119 DDNIPEMFQAKLGDYRGSGYDRGHQVPAADCKFSQEAMNETFYLSNMCPQVGDGFNRNYWAYFED 183

  Fly   197 HVRRLTKTYSNVYVCTGPLYLPHKEDDGKSYVKYEVIG-ANTVAVPTHFYKVIVGESADHKLHME 260
            ..||||..|.:|.:.|||||||.|.:.|:..|:|.||| ...|||||||:|||:.|.:.......
pombe   184 WCRRLTSKYGSVTIMTGPLYLPKKNERGQWEVQYRVIGNPPNVAVPTHFFKVIIAEKSGEPTSSP 248

  Fly   261 S---YVMPNQVISNDTPISVFQVPPESVERSAGLLFFDQI---NRKQL 302
            |   :|:||:.|:::.|:..|.||.|.|||::||.....:   |||||
pombe   249 SVAAFVLPNKPIADNFPLKNFAVPVEVVERASGLEILSNVPKGNRKQL 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EndoGNP_610737.1 NUC1 39..305 CDD:224777 109/273 (40%)
NUC 77..309 CDD:238043 101/234 (43%)
pnu1NP_594598.2 NUC1 5..309 CDD:224777 118/308 (38%)
NUC 78..289 CDD:214683 91/211 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 173 1.000 Domainoid score I870
eggNOG 1 0.900 - - E1_COG1864
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55823
Inparanoid 1 1.050 177 1.000 Inparanoid score I1145
OMA 1 1.010 - - QHG52002
OrthoFinder 1 1.000 - - FOG0003231
OrthoInspector 1 1.000 - - otm47029
orthoMCL 1 0.900 - - OOG6_102078
Panther 1 1.100 - - LDO PTHR13966
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R945
SonicParanoid 1 1.000 - - X3743
TreeFam 1 0.960 - -
1413.860

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