DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT5 and Cpn60beta4

DIOPT Version :10

Sequence 1:NP_523707.1 Gene:CCT5 / 36308 FlyBaseID:FBgn0010621 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_173947.1 Gene:Cpn60beta4 / 839164 AraportID:AT1G26230 Length:611 Species:Arabidopsis thaliana


Alignment Length:576 Identity:118/576 - (20%)
Similarity:233/576 - (40%) Gaps:120/576 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 PFIILRDQERQKRI--TGTDAIKTHIMA-ARQIASTLKTSLGPKGLDKIMVSPDGDVTVTNDGAT 77
            |..:||.:...|.:  ....::...:.| |..:|..|..:|||||.:.::.:..|...:.|||.|
plant    30 PNFVLRVRAAAKEVHFNRDGSVTKKLQAGADMVAKLLGVTLGPKGRNVVLQNKYGPPRIVNDGET 94

  Fly    78 IMKLMEVDHEI----AKLMVQLSQSQDDEIGDGTTGVVVLAGALLEQAEGLIDRGIHPIRIADGF 138
            ::|.:|::..:    .||:.|.....:|..|||:|..::||..|:.:...:|..|.:||::|.|.
plant    95 VLKEIELEDPLENVGVKLVRQAGAKTNDLAGDGSTTSIILAHGLITEGIKVISAGTNPIQVARGI 159

  Fly   139 ELAAQCAIKQLDAIAQPFPVDPKNKEPLIQIAMTTLGS-----KIVNKCHRQMAEMAVDAVLNVA 198
            |...:..:.:|.::::..     ....|..:|..:.|:     .:::...:|:..      ..|.
plant   160 EKTTKALVLELKSMSREI-----EDHELAHVAAVSAGNDYEVGNMISNAFQQVGR------TGVV 213

  Fly   199 DIEKKDV---NFELIKIETKVGGRMEDSMLVKGVIVDKTLSHSQMPKELRNVKLAILTCPFEPPK 260
            .|||...   |.|:::     |.:.....|....:.|:    .:...|..:.||.::......||
plant   214 TIEKGKYLVNNLEIVE-----GMQFNRGYLSPYFVTDR----RKREAEFHDCKLLLVDKKITNPK 269

  Fly   261 PKTKHKLDVTSAEDYRAL---REYEQEKFTQMVK-QVKDAGATLAICQWGFDDEANHLLLQQELP 321
            ...| .||....|::..|   .:.||:....::: ::|......||....|.:..:|.|      
plant   270 DMFK-ILDSAVKEEFPVLIVAEDIEQDALAPVIRNKLKGNLKVAAIKAPAFGERKSHCL------ 327

  Fly   322 AVRWVGGPEIELIAIATGGRIVPRFEELTPEKLG--VAGLVREMAFGTSKDKMLVIEECKNSKAV 384
                      :.:||.||..::.....|:.||.|  |.|..:.:.  .:||..|::......|||
plant   328 ----------DDLAIFTGATVIRDEMGLSLEKAGKEVLGTAKRVL--VTKDSTLIVTNGFTQKAV 380

  Fly   385 --------------------------TIFLRGGNAMI---------IAEAKRSIHDAICVVRSLV 414
                                      ...|.||.|:|         :.:.:..:.||:...:|.:
plant   381 DERVSQIKNLIENTEENFQKKILNERVARLSGGIAIIQVGALTQVELKDKQLKVEDALNATKSAI 445

  Fly   415 KDSRIVYGGGAAEISCSLAVAKEADQLSTLEQYAFRAFSVALESIPLALAENSGLHPIETLSELK 479
            ::. ||.|||.|.:..:..|.:..:.|...||      .:..|....||:     :||..::   
plant   446 EEG-IVVGGGCALLRLATKVDRIKETLDNTEQ------KIGAEIFKKALS-----YPIRLIA--- 495

  Fly   480 ARQVAEKKSSLGVDCMLSGDSDMKSHNVVESLHSKKQQILLS-----TQLVKMILK 530
              :.|:...::.::.:||..:.|..:|..::.:   :.::|:     |::|:..|:
plant   496 --KNADTNGNIVIEKVLSNKNTMYGYNAAKNQY---EDLMLAGIIDPTKVVRCCLE 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT5NP_523707.1 TCP1_epsilon 11..536 CDD:239455 118/576 (20%)
Cpn60beta4NP_173947.1 chaperonin_like 1..576 CDD:351886 118/576 (20%)

Return to query results.
Submit another query.