DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT5 and Bbs10

DIOPT Version :9

Sequence 1:NP_523707.1 Gene:CCT5 / 36308 FlyBaseID:FBgn0010621 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_082190.1 Gene:Bbs10 / 71769 MGIID:1919019 Length:713 Species:Mus musculus


Alignment Length:560 Identity:106/560 - (18%)
Similarity:214/560 - (38%) Gaps:124/560 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 IMAARQIASTLKT----SLGPKGLDKIMVSPDGDVTVTNDGATIMKLMEVDHEIAKLMVQLSQSQ 99
            :.||.::|..|::    .:||:|...:...|.|:|.::.||..:::.:.::|.:|:::|....|.
Mouse     7 VTAALRVAEVLESIANRCVGPEGGQVLCTKPTGEVLLSRDGGCLLEALHLEHPLARMIVACVSSH 71

  Fly   100 DDEIGDGTTGVVVLAGALLEQAEGLIDRGIHPI--RIADGF---ELAAQ-------CAIKQLDAI 152
            ..:.|||....::....||        ||:|.|  :..|.|   .:.:.       |..|.:...
Mouse    72 LKKTGDGAKTFIIFLCHLL--------RGLHAIGEKGKDSFTSENIQSHERHWKNCCQWKSISQA 128

  Fly   153 AQPFP-------VDPK-NKEPLIQIAMTTLGSKIVNK----------C-------HRQMAEMAVD 192
            .|.|.       ||.. ::..|...:.:|.|.|:...          |       ||.::::..|
Mouse   129 LQTFQTQTLGCIVDRSLSRHYLSVFSSSTEGRKLCRHSLELLLEAYFCGRVGRNNHRFISQLMCD 193

  Fly   193 AVLNVADIEKKDVNFELIK---IETKVGGR---MEDSMLVKGVIVDKTLSHSQMPKELRNVKLAI 251
            .|......|.....|||:.   .|..||..   :.||.::.|:::.:..| ...|.: .::::.|
Mouse   194 YVFKCMACESGVEVFELLDHCFAELNVGVTGLPVSDSRIIDGLVLPRDFS-MYCPAD-GDIRMVI 256

  Fly   252 LTCPFEPPKPKTKHKLDVTSAEDYRALREYEQEKFTQMVKQVKDAGATLAICQWGFDDEANHLLL 316
            :|...:|.......:..:.|...::|.:.:..::...::..::.....|.:......|...:...
Mouse   257 VTEILQPQFSSAGSEFVLNSETQFQASQCWITDRTKTVMNHLRGQNVKLLLTSVKQPDLVIYCAR 321

  Fly   317 QQELPAVRWVGGPEIELIAIATGGRIVPRFEELTPEKLGVAGLVREMAFGTSKDKMLVIEECK-- 379
            ...:..|..:...|:.|:...||         |:|      .::.|:|.........:::.||  
Mouse   322 LNSISVVECLSAEEVSLVQRITG---------LSP------CVLPEVASQCEISDSTLVKFCKPL 371

  Fly   380 --NSKAV--------------TIFLRGGNAMIIAEAKRSIHDAICVVRSLVKDSRIVYGGGAAEI 428
              .||..              ::.|.|....::.:.:|:.|.|..::|.|..|..:.|.....: 
Mouse   372 ILRSKRYVHLGLISTCAFIPHSMVLCGPVLGLVEQHERAFHGAFKMLRQLFTDLDLNYIIQTKQ- 435

  Fly   429 SCS---LA-------------------VAKEADQLST---LEQYA-FRAFSVALES-IPLALAEN 466
            .|:   ||                   |||..::|.|   ||.|: ..|....|.: .|.:..:.
Mouse   436 QCNPSPLAYDNSRERNHSPETDKYQDIVAKSKNKLETQTHLEVYSGLGASDTELRAGKPWSAHKK 500

  Fly   467 SGLHPIETLSELKARQVAEKKSSLGVDCMLSGDSDMKSHN 506
            :.:.|.:|...||.  :..::|.:..:|.||    :::|:
Mouse   501 TPIAPSQTDEMLKC--LPPERSGIIDNCDLS----IENHS 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT5NP_523707.1 TCP1_epsilon 11..536 CDD:239455 106/560 (19%)
Cpn60_TCP1 45..534 CDD:278544 104/554 (19%)
Bbs10NP_082190.1 chaperonin_like 7..>111 CDD:295468 27/111 (24%)
Cpn60_TCP1 13..>424 CDD:278544 79/435 (18%)
CNH 111..>209 CDD:295303 16/97 (16%)
chaperonin_like <587..695 CDD:295468
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.