DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT5 and cct4

DIOPT Version :9

Sequence 1:NP_523707.1 Gene:CCT5 / 36308 FlyBaseID:FBgn0010621 Length:542 Species:Drosophila melanogaster
Sequence 2:XP_012818347.1 Gene:cct4 / 448604 XenbaseID:XB-GENE-974483 Length:561 Species:Xenopus tropicalis


Alignment Length:496 Identity:191/496 - (38%)
Similarity:292/496 - (58%) Gaps:35/496 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RDQERQKRITGTDAIKTHIMAARQIASTLKTSLGPKGLDKIMVSPDGDVTVTNDGATIMKLMEVD 85
            ||:..|.|.       ::|.|.:.:|..::|||||||:||::....||||:|||||||:|||:|.
 Frog    30 RDKPAQIRF-------SNISAGKAVADAVRTSLGPKGMDKMIQDGKGDVTITNDGATILKLMQVL 87

  Fly    86 HEIAKLMVQLSQSQDDEIGDGTTGVVVLAGALLEQAEGLIDRGIHPIRIADGFELAAQCAIKQLD 150
            |..||::|:||::||.|.|||||.|||:|||||:....|:.:||||..|::.|:||:...|:.|.
 Frog    88 HPAAKMLVELSKAQDIEAGDGTTSVVVIAGALLDACAKLLQKGIHPTTISESFQLASDKGIEVLT 152

  Fly   151 AIAQPFPVDPKNKEPLIQIAMTTLGSKIVNKCHRQMAEMAVDAVLNVADIE-KKDVNFELIKIET 214
            .::|  .|:..::|.|:..|.|:|.||:|::....:|.|:||||:.|.|.: ...|:...|||..
 Frog   153 NMSQ--SVELSDRETLLNSATTSLNSKVVSQYSSLLAPMSVDAVMKVIDPQTANSVDLRDIKIVK 215

  Fly   215 KVGGRMEDSMLVKGVIVDKTLSHSQMPKELRNVKLAILTCPFEPPKPKTKHKLDVTSAEDY---- 275
            |:||.::|..:|.|:::.:..:::.:.: :...|:.::......||....:::.|:   ||    
 Frog   216 KLGGTIDDCEMVDGLVLTQKAANTGVTR-VEKAKIGLIQFCLSAPKTDMDNQIVVS---DYAQMD 276

  Fly   276 RALREYEQEKFTQMVKQVKDAGATLAICQW-----GFDDEANHLLLQQELPAVRWVGGPEIELIA 335
            |.||| |:.....:|||:|.||..:.:.|.     ...|.|.|.|.:.::..|:.:...:||.|.
 Frog   277 RVLRE-ERTYILNLVKQIKKAGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDIEREDIEFIC 340

  Fly   336 IATGGRIVPRFEELTPEKLGVAGLVREMAFGTSKDKMLVIEECKN-SKAVTIFLRGGNAMIIAEA 399
            ...|.:.|...::.|.:.|..|.|..|::...| .|::.|..|.| .|.|||.:||.|.::|.||
 Frog   341 KTIGTKPVAHIDQFTADMLASAELAEEVSLNGS-GKLVKITGCANPGKTVTIVVRGSNKLVIEEA 404

  Fly   400 KRSIHDAICVVRSLVKDSRIVYGGGAAEISCSLAVAKEADQLSTLEQYAFRAFSVALESIPLALA 464
            :||||||:||:|.|||...::.||||.||..||.:.:.|..||.:|.|..|||:.|||.||..||
 Frog   405 ERSIHDALCVIRCLVKKRALIAGGGAPEIELSLRLNEYARTLSGMESYCIRAFADALEIIPFTLA 469

  Fly   465 ENSGLHPIETLSELKARQV-AEKKSSLGV--------DCML 496
            ||:||:||.|::||:.|.. .||.:.:.|        ||.|
 Frog   470 ENAGLNPISTVTELRNRHAQGEKTAGINVRKVKSSIPDCSL 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT5NP_523707.1 TCP1_epsilon 11..536 CDD:239455 191/496 (39%)
Cpn60_TCP1 45..534 CDD:278544 185/472 (39%)
cct4XP_012818347.1 TCP1_delta 28..500 CDD:239454 188/484 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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