DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT5 and cct2

DIOPT Version :10

Sequence 1:NP_523707.1 Gene:CCT5 / 36308 FlyBaseID:FBgn0010621 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_001006757.1 Gene:cct2 / 448434 XenbaseID:XB-GENE-1006535 Length:535 Species:Xenopus tropicalis


Alignment Length:521 Identity:176/521 - (33%)
Similarity:281/521 - (53%) Gaps:25/521 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 DQERQKRITGTDAIKTHIMAARQIASTLKTSLGPKGLDKIMVSP--DGDVTVTNDGATIMKLMEV 84
            |:|:.:     .|..:..:.|..|...:|::|||||:|||::|.  |..||||||||||:|.:.:
 Frog    17 DEEKAE-----TARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDSTVTVTNDGATILKAIGI 76

  Fly    85 DHEIAKLMVQLSQSQDDEIGDGTTGVVVLAGALLEQAEGLIDRGIHPIRIADGFELAAQCAIKQL 149
            |:..|:::|.:|:.||||:|||||.|.|||..||.:||.|:.|.|||..|..|:..|.|.|.:.|
 Frog    77 DNPAAQVLVDMSKVQDDEVGDGTTSVTVLAAELLREAEVLVARKIHPQTIISGWRQATQVAREAL 141

  Fly   150 DAIAQPFPVDPKNKE-----PLIQIAMTTLGSKIVNKCHRQMAEMAVDAVLNVADIEKKDVNFEL 209
            ...:    ||..|.|     .|:.||.|||.||::.......:::||:|||.:    |...|.|.
 Frog   142 LNAS----VDHGNDEEKFRCDLLNIARTTLSSKLLTHHKDHFSKLAVEAVLRL----KGSGNLEA 198

  Fly   210 IKIETKVGGRMEDSMLVKGVIVDKTLSHSQMPKELRNVKLAILTCPFEPPKPKT-KHKLDVTSAE 273
            |.:..|:||.:.:|.|.:|.::||.:..:| ||.:.|.|:.|.....:..|.|. ..::.|.|..
 Frog   199 IHVIKKLGGSLTESYLDEGFLLDKKIGVNQ-PKRIENAKILIANTGMDTDKIKIFGSRVRVDSTA 262

  Fly   274 DYRALREYEQEKFTQMVKQVKDAGATLAICQWGFDDEANHLLLQQELPAVRWVGGPEIELIAIAT 338
            ....:...|:||..:.|:::...|....|.:....:....|.....:.|:.......:|.:|:.|
 Frog   263 KVAEIELAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFATAGVMAIEHADFAGVERLALVT 327

  Fly   339 GGRIVPRFEELTPEKLGVAGLVREMAFGTSKDKMLVIEECKNSKAVTIFLRGGNAMIIAEAKRSI 403
            ||.|...|:.....|||...|:.|:..|  :||::........:|.||.|||....|:.||:||:
 Frog   328 GGEIASTFDHPELVKLGTCKLIEEVMIG--EDKLIHFSGVAMGEACTIVLRGATQQILDEAERSL 390

  Fly   404 HDAICVVRSLVKDSRIVYGGGAAEISCSLAVAKEADQLSTLEQYAFRAFSVALESIPLALAENSG 468
            |||:||:...|||:|.|||||.:|:..:.||.:.|.:....|..|..:|:.||..:|..:|:|:|
 Frog   391 HDALCVLAQTVKDTRTVYGGGCSEMLMAHAVTELAIRTPGKESVAMESFAKALRMLPTIIADNAG 455

  Fly   469 LHPIETLSELKARQVAEKKSSLGVDCMLSGDSDMKSHNVVESLHSKKQQILLSTQLVKMILKIDD 533
            ....:.:|:|:|.. :|.||:.|:|.......:|....:.||...|:|.:|.:::..::||::|:
 Frog   456 YDSADLVSQLRAAH-SEGKSTYGLDMKNGTIGEMGELGITESFQVKRQVLLSASEAAEVILRVDN 519

  Fly   534 V 534
            :
 Frog   520 I 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT5NP_523707.1 TCP1_epsilon 11..536 CDD:239455 176/521 (34%)
cct2NP_001006757.1 TCP1_beta 11..527 CDD:239452 176/521 (34%)

Return to query results.
Submit another query.