DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT5 and Cct6b

DIOPT Version :9

Sequence 1:NP_523707.1 Gene:CCT5 / 36308 FlyBaseID:FBgn0010621 Length:542 Species:Drosophila melanogaster
Sequence 2:XP_017452911.1 Gene:Cct6b / 363658 RGDID:1359453 Length:543 Species:Rattus norvegicus


Alignment Length:533 Identity:156/533 - (29%)
Similarity:278/533 - (52%) Gaps:50/533 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 AIKTHIMAARQIASTLKTSLGPKGLDKIMVSPDGDVTVTNDGATIMKLMEVDHEIAKLMVQLSQS 98
            |:..:|.|||.:...|:.||||||..|::||..||:.:|.||..::..|::.|..|.::.:::.:
  Rat    19 ALAVNICAARGLQDVLRPSLGPKGALKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASIIAKVAAA 83

  Fly    99 QDDEIGDGTTGVVVLAGALLEQAEGLIDRGIHPIRIADGFELAAQCAIKQLDAIAQPFPVDPKNK 163
            ||...|||||..|::.|.||:||:..|..|:||..||:||::|...|::.||.|    .|..:.|
  Rat    84 QDHITGDGTTSNVLIIGELLKQADLYISEGLHPRIIAEGFDVAKTKALEVLDKI----KVQKEMK 144

  Fly   164 -EPLIQIAMTTLGSKIVNKCHRQMAEMAVDAVL-NVADIEKKDVNFELIKIE-----------TK 215
             |.|:.:|.|:|.:|:    |.::|::..:||: :|..|.:..:..:|..:|           |:
  Rat   145 REMLLDVARTSLRTKV----HTELADILTEAVVDSVLAIRRPGIPIDLFMVEIVEMRHKSETDTQ 205

  Fly   216 VGGRMED---SMLVKGVIVDKTLSHSQMPKELRNVKLAILTCPFEPPKPKTKHKLDVTSAEDYRA 277
            .|.|.:.   ..||:|:::|....|.:|.|::::..:.|.....|      ..|.:|:|...|:.
  Rat   206 AGDRTQGLALPRLVRGLVLDHGARHPRMKKQVQDAYILICNVSLE------YEKTEVSSGFFYKT 264

  Fly   278 LREYE-----QEKFTQ-MVKQVKDA---------GATLAICQWGFDDEANHLLLQQELPAVRWVG 327
            :.|.|     :.||.: .|:::.|.         ...:.|.|.|.|..:..:|.:..:.|:|...
  Rat   265 VEEKEKLVKAERKFIEDRVQKIIDLKQKVCAESNKGFVVINQKGIDPVSLEMLAKHNIVALRRAK 329

  Fly   328 GPEIELIAIATGGRIVPRFEELTPEKLGVAGLVREMAFGTSKDKMLVIEECKNSKAVTIFLRGGN 392
            ...:|.:.:|.||..|...|:|:.|.||.||||.|...|  ::|...||:|.|..:||:.::|.|
  Rat   330 RRNLERLTLACGGLAVNSLEDLSEECLGHAGLVFEYTLG--EEKFTFIEDCVNPLSVTLLVKGPN 392

  Fly   393 AMIIAEAKRSIHDAICVVRSLVKDSRIVYGGGAAEISCSLAVAKEADQLSTLEQYAFRAFSVALE 457
            ...:.:.|.::.|.:..|::.::|..:|.|.||.|::.:.|:......:....:...:||:.||.
  Rat   393 KHTLIQIKDALRDGLRAVKNAIEDGCVVPGAGAVEVAIAEALVNYKHCVQGRARLGIQAFADALL 457

  Fly   458 SIPLALAENSGLHPIETLSELKARQVAEKKSSLGVDCMLSGDSDMKSHNVVESLHSKKQQILLS- 521
            .||..||:|||....|||.:::.:. ||.|..:|:| :.:|:..:.:...:...:..|:.||.| 
  Rat   458 IIPKVLAQNSGYDLQETLIKIQTKH-AESKELVGID-LNTGEPMVAAEAGIWDNYCVKKHILHSC 520

  Fly   522 TQLVKMILKIDDV 534
            |.:...:|.:|::
  Rat   521 TVIATNVLLVDEI 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT5NP_523707.1 TCP1_epsilon 11..536 CDD:239455 156/533 (29%)
Cpn60_TCP1 45..534 CDD:278544 151/520 (29%)
Cct6bXP_017452911.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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