DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT5 and CCT8

DIOPT Version :10

Sequence 1:NP_523707.1 Gene:CCT5 / 36308 FlyBaseID:FBgn0010621 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_610418.1 Gene:CCT8 / 35882 FlyBaseID:FBgn0284436 Length:546 Species:Drosophila melanogaster


Alignment Length:521 Identity:152/521 - (29%)
Similarity:268/521 - (51%) Gaps:26/521 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 DAIKTHIMAARQIASTLKTSLGPKGLDKIMVSPDGDVTVTNDGATIMKLMEVDHEIAKLMVQLSQ 97
            :|:..:|.|.::.|.|::::.||.|::|::::......||:|..|||:.::|:|..|||:|..||
  Fly    27 EAVFRNISACKEFAQTMRSAYGPNGMNKMIINHIEKQFVTSDAGTIMRELDVEHPAAKLIVMASQ 91

  Fly    98 SQDDEIGDGTTGVVVLAGALLEQAEGLIDRGIHPIRIADGFELAAQCAIKQLDAIAQPFPVDPKN 162
            .||.|:||||..||||||||||.||.|:..||....|:||:|.|.:.|::.|..:......|.:|
  Fly    92 MQDAEVGDGTNFVVVLAGALLESAEELLRLGITTAEISDGYEKALEKALEILPNLVSHKIEDYRN 156

  Fly   163 KEPLIQIAMTTLGSKIVNKCHRQ---MAEMAVDAVLNVADIEKKDVNFELIKIETKVGGRMEDSM 224
            .|.:.::..|:    |::|.:.|   :.::...|.:::.. ::...|.:.|:|...:|..:..|.
  Fly   157 VEKVKEVLRTS----IMSKQYGQEDFLNDLVSKACVSILP-DEGTFNVDNIRICKILGSGLTKSE 216

  Fly   225 LVKGVI----VDKTLSHSQMPKELRNVKLAILTCPFEPPKPKTKHKLDVTSAEDYRALREYEQEK 285
            :|:|::    |:..:::::      ..|:.|.:||.:..:.:||..:.:.||::..:....|:..
  Fly   217 VVRGMVFKRFVEGDVTYAE------KAKIVIFSCPVDIIQTETKGTVLIKSADELLSFSSGEESL 275

  Fly   286 FTQMVKQVKDAGATLAICQWGFDDEANHLLLQQELPAVRWVGGPEIELIAIATGGRIVPRFEELT 350
            ....:|.:.|||..:.:......|.|.|.|.:..|.|||.....::..::.:....::||....:
  Fly   276 LESQIKAIADAGVKVVVAGGKVGDMALHFLNKYGLMAVRLNSKFDLRRLSRSVNATVLPRITTPS 340

  Fly   351 PEKLGVAGLVREMAFGTSKDKMLVI--EECKNSKAVTIFLRGGNAMIIAEAKRSIHDAICVVRSL 413
            .|:||....|.....|   |..:|.  .|.|:|:..|:.:||.....:.:.:|::.|||...:.|
  Fly   341 QEELGYCDKVCIEELG---DTTIVAFRNEGKDSRIATVVIRGATDNFMDDIERALDDAINNFKCL 402

  Fly   414 VKDSRIVYGGGAAEISCSLAVAKEADQLSTLEQYAFRAFSVALESIPLALAENSGLHPIETLSEL 478
            .:|.|.:.|.||.||..:..::..||.|..|:|||.|.|:.|||..|.|||||||::..|.:::|
  Fly   403 TRDGRYLPGAGATEIELATQLSAYADTLPGLDQYAVRKFANALEVFPKALAENSGINGTEIVNQL 467

  Fly   479 KARQVAEKKSSLGVDCMLSGDS--DMKSHNVVESLHSKKQQILLSTQLVKMILKIDD-VRSKNEG 540
            ......|...::|.|......|  |.....:.:...||...:..:......|||:|. :.:|..|
  Fly   468 YLAHNNEAGKTIGFDIEAEKASTIDTTKAKLFDLYQSKFWGLKYAVGAAATILKVDQIIMAKRAG 532

  Fly   541 G 541
            |
  Fly   533 G 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT5NP_523707.1 TCP1_epsilon 11..536 CDD:239455 149/514 (29%)
CCT8NP_610418.1 TCP1_theta 20..529 CDD:239457 149/515 (29%)

Return to query results.
Submit another query.