DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT5 and CCT4

DIOPT Version :9

Sequence 1:NP_523707.1 Gene:CCT5 / 36308 FlyBaseID:FBgn0010621 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_609579.1 Gene:CCT4 / 34674 FlyBaseID:FBgn0032444 Length:533 Species:Drosophila melanogaster


Alignment Length:541 Identity:200/541 - (36%)
Similarity:313/541 - (57%) Gaps:35/541 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PGTFAFDEYGRPFIILRDQERQKRITGTDAIKTHIMAARQIASTLKTSLGPKGLDKIMVSPDGDV 69
            |...||.:..:|               ||...::|.||:.::..::|||||:|:||::.:.:|:|
  Fly    12 PTAKAFKDKSKP---------------TDVRLSNIQAAKAVSDAIRTSLGPRGMDKMIQAGNGEV 61

  Fly    70 TVTNDGATIMKLMEVDHEIAKLMVQLSQSQDDEIGDGTTGVVVLAGALLEQAEGLIDRGIHPIRI 134
            ::|||||||:|.|.|.|..||::|:||::||...|||||.|||:||||||..|.|:.:|:||..|
  Fly    62 SITNDGATILKQMNVLHPAAKMLVELSRAQDVAAGDGTTSVVVIAGALLEACEKLLQKGLHPTAI 126

  Fly   135 ADGFELAAQCAIKQLDAIAQPFPVDPKNKEPLIQIAMTTLGSKIVNKCHRQMAEMAVDAVLNVAD 199
            :|.|:..:..|::.|..::.|..:|  ::|.||:.|.|:|.||:|::....:|.:||||||.|.|
  Fly   127 SDSFQRCSNKAVEILKQMSTPIELD--DRETLIKSASTSLNSKVVSQQSSLLAPIAVDAVLKVTD 189

  Fly   200 IEKK-DVNFELIKIETKVGGRMEDSMLVKGVIVDKTLSHSQMPKELRNVKLAILTCPFEPPKPKT 263
            ..|: .|:.:.||:.:.:||.:||:.||.|::.....:.|..||.:...|:.::......||...
  Fly   190 PGKETSVDLKNIKVISSLGGTVEDTELVDGLVFTCRSAGSNAPKRIEKAKIGLIQFCISAPKTDM 254

  Fly   264 KHKLDVTSAEDY----RALREYEQEKFTQMVKQVKDAGATLAICQWGF-----DDEANHLLLQQE 319
            .|.:.|:   ||    |.|:| |:.....:|||:|.:|..:.:.|...     .|.|.|.|.:.:
  Fly   255 DHNVIVS---DYAAMDRVLKE-ERSYILNIVKQIKKSGCNVLLVQKSILRDAVSDLAQHFLDKIK 315

  Fly   320 LPAVRWVGGPEIELIAIATGGRIVPRFEELTPEKLGVAGLVREMAFGTSKDKMLVIEECKN-SKA 383
            ...|:.|...:||.:......|.:...:..|.|.|..|.||.|:|.||  :|.:.|...:| .:.
  Fly   316 CMVVKDVEREDIEFVCKTLHCRPIASLDHFTAENLSSADLVEEVASGT--NKFVKITGIQNMGRT 378

  Fly   384 VTIFLRGGNAMIIAEAKRSIHDAICVVRSLVKDSRIVYGGGAAEISCSLAVAKEADQLSTLEQYA 448
            |:|..||.|.:::.||.||:|||:||||.|||....:.||||.||..:|.:|..|..:..::.|.
  Fly   379 VSIICRGSNKLVLEEAARSLHDALCVVRCLVKLRAQIVGGGAPEIEMALQLAALAQTVEGVDAYC 443

  Fly   449 FRAFSVALESIPLALAENSGLHPIETLSELKARQVAEKKSSLGVDCMLSGDSDMKSHNVVESLHS 513
            ||||:.|||.||..||||:||:||.|::||:.|. |:.:.:.|::......:|:.:.|||:.|..
  Fly   444 FRAFADALEVIPSTLAENAGLNPIATVTELRNRH-AQGEKNAGINVRKGAITDIFAENVVQPLLV 507

  Fly   514 KKQQILLSTQLVKMILKIDDV 534
            ....|.|:|:.::.||||||:
  Fly   508 SISSITLATETIRSILKIDDI 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT5NP_523707.1 TCP1_epsilon 11..536 CDD:239455 197/535 (37%)
Cpn60_TCP1 45..534 CDD:278544 190/499 (38%)
CCT4NP_609579.1 TCP1_delta 18..531 CDD:239454 197/535 (37%)
Cpn60_TCP1 37..529 CDD:278544 191/501 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453405
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11353
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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