DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT5 and CCT6

DIOPT Version :9

Sequence 1:NP_523707.1 Gene:CCT5 / 36308 FlyBaseID:FBgn0010621 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_573066.1 Gene:CCT6 / 32518 FlyBaseID:FBgn0027329 Length:533 Species:Drosophila melanogaster


Alignment Length:515 Identity:158/515 - (30%)
Similarity:269/515 - (52%) Gaps:24/515 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 AIKTHIMAARQIASTLKTSLGPKGLDKIMVSPDGDVTVTNDGATIMKLMEVDHEIAKLMVQLSQS 98
            |:..:|.||:.:...::|:|||||..|::||..||:.:|.||..::..|::.|..|.::.:.|.:
  Fly    19 ALAINISAAKGLQDVMRTNLGPKGTVKMLVSGAGDIKITKDGNVLLHEMQIQHPTASMIARASTA 83

  Fly    99 QDDEIGDGTTGVVVLAGALLEQAEGLIDRGIHPIRIADGFELAAQCAIKQLDAIAQPFPVDPKNK 163
            |||..|||||..|:|.|.||:||:..:..|:||..:.||||.|...|::.||.:..|..::.|| 
  Fly    84 QDDSTGDGTTTTVMLIGELLKQADIYLSEGLHPRIMTDGFEKARDKALEVLDQVKVPVEINKKN- 147

  Fly   164 EPLIQIAMTTLGSKIVNKCHRQMAEMAVDAVLNVADIEK-KDVNFELIKIETKVGGRMEDSMLVK 227
              |:::|.|:|.:|:.......:.::.|:|||.:|..:| |.|:..::::.........|:.||:
  Fly   148 --LVEVANTSLKTKVHPALADLLTDVCVNAVLTIASADKTKPVDLHMVELMEMQHKSDTDTQLVR 210

  Fly   228 GVIVDKTLSHSQMPKELRNVKLAILTCPFEPPKPKTKHKLDVTSAEDYRALREYEQEKFTQMVKQ 292
            |:::|....|..|||.|.|..:.......|..|.:........:||:..|....|:|...|.||:
  Fly   211 GLVMDHGARHPDMPKRLENAYILTANVSLEYEKAEVNSGFFYKTAEEREAFVRAEREFIDQRVKK 275

  Fly   293 VKDAGATLA---------ICQWGFDDEANHLLLQQELPAVRWVGGPEIELIAIATGGRIVPRFEE 348
            |.:...::.         |.|.|.|..:...|.::.:.|:|......:|.:::|.||..:..|::
  Fly   276 VIELKRSVCDGTDKTFVLINQKGIDPISLDALAKEGILALRRAKRRNMERLSLACGGTAMNSFDD 340

  Fly   349 LTPEKLGVAGLVREMAFGTSKDKMLVIEECKNSKAVTIFLRGGNAMIIAEAKRSIHDAICVVRSL 413
            |..|.||.||:|.|...|  ::|...:|:|||..:|||.::|.|...|.:.|.:|.|.:..:.:.
  Fly   341 LQEEHLGYAGVVYEHVLG--ENKYTFVEDCKNPLSVTILIKGPNKHTITQIKDAIRDGLRAINNT 403

  Fly   414 VKDSRIVYGGGAAEISCSLAVAKEADQLSTLEQYAFRAFSVALESIPLALAENSGLHPIETLSEL 478
            :.|..:|.|.||.|:.....:....|.:....:.|.:||:.||..||..||.|||....:|:.:|
  Fly   404 IADKALVPGAGAFEVRAYNELVAFKDTIKGKSRLAVQAFADALLVIPKTLAVNSGYDAQDTIVKL 468

  Fly   479 KARQVAEKKSS--LGVDCMLSGDSDMKSHNV-VESLHSKKQQILLSTQLV-KMILKIDDV 534
               .|.::.|.  :|:|  |:....||..:: |...:..|:|||.|..:: ..:|.:|:|
  Fly   469 ---TVEDRLSPELVGLD--LATGEPMKPVDLGVYDNYIVKKQILNSCSIIASNLLLVDEV 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT5NP_523707.1 TCP1_epsilon 11..536 CDD:239455 158/515 (31%)
Cpn60_TCP1 45..534 CDD:278544 153/502 (30%)
CCT6NP_573066.1 chap_CCT_zeta 3..532 CDD:274088 158/515 (31%)
TCP1_zeta 7..528 CDD:239458 158/515 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453419
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11353
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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