DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT5 and Hsp60A

DIOPT Version :9

Sequence 1:NP_523707.1 Gene:CCT5 / 36308 FlyBaseID:FBgn0010621 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_511115.2 Gene:Hsp60A / 32045 FlyBaseID:FBgn0015245 Length:573 Species:Drosophila melanogaster


Alignment Length:570 Identity:129/570 - (22%)
Similarity:226/570 - (39%) Gaps:148/570 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 RQKRITGTDAIKTHIMAARQIASTLKTSLGPKGLDKIMVSPDGDVTVTNDGATIMKLMEVDHEI- 88
            |...:.|.|.          :|..:..::||||.:.|:....|...:|.||.|:.|.:|:..:. 
  Fly    33 RAMMLQGVDV----------LADAVAVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIELKDKFQ 87

  Fly    89 ---AKLMVQLSQSQDDEIGDGTTGVVVLAGALLEQAEGLIDRGIHPIRIADGFELAAQCAIKQLD 150
               |||:..::.:.::|.|||||...|||.|:.::....|.:|.:|:.|..|..||.:.....|.
  Fly    88 NIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPVEIRRGVMLAVETVKDNLK 152

  Fly   151 AIAQPFPVDPKNKEPLIQIA-MTTLGSKIV-NKCHRQMAEMAVDAVLNVADIEKKDVNFELIK-- 211
            .:::|.    ...|.:.|:| ::..|.:.: |.....|.::..|.|:.|.|.:......|:|:  
  Fly   153 TMSRPV----STPEEIAQVATISANGDQAIGNLISEAMKKVGRDGVITVKDGKTLTDELEVIEGM 213

  Fly   212 -----------IETKVGGRME--DSMLVKGVIVDKTLSHSQ--MPK-ELRNVKLAILTCPFEPPK 260
                       |.:..|.::|  |::|   ::.:|.:|..|  :|. ||.|.:          .|
  Fly   214 KFDRGYISPYFINSSKGAKVEFQDALL---LLSEKKISSVQSIIPALELANAQ----------RK 265

  Fly   261 PKTKHKLDVTSAEDY--RALREYEQEKFTQMVKQVKDAGATLAICQWGFDDEANHLLLQQELPAV 323
            |.      |..|||.  .||.       |.:|.::|......|:...||.|.....|..      
  Fly   266 PL------VIIAEDIDGEALS-------TLVVNRLKIGLQVAAVKAPGFGDNRKSTLTD------ 311

  Fly   324 RWVGGPEIELIAIATGGRI------VPRFEELTPEKLGVAGLVREMAFGTSKDKMLV-------- 374
                      :|||:||.:      :.:.|::....||..|   |:.. |..|.:|:        
  Fly   312 ----------MAIASGGIVFGDDADLVKLEDVKVSDLGQVG---EVVI-TKDDTLLLKGKGKKDD 362

  Fly   375 -----------IEE--------------CKNSKAVTIFLRGGNAMI-IAEAKRSIHDAICVVRSL 413
                       ||:              .:.:..|.:...||::.: :.|.|..:|||:...|:.
  Fly   363 VLRRANQIKDQIEDTTSEYEKEKLQERLARLASGVALLRVGGSSEVEVNEKKDRVHDALNATRAA 427

  Fly   414 VKDSRIVYGGGAAEISCSLAVAKEADQLSTLEQYAFRAFSV--ALESIPLALAENSGLHPIETLS 476
            |::. ||.|||.|.:.|   :.|.....:|.|........|  ||....:.:|:|:|:.     .
  Fly   428 VEEG-IVPGGGTALLRC---IEKLEGVETTNEDQKLGVEIVRRALRMPCMTIAKNAGVD-----G 483

  Fly   477 ELKARQVAEKKSSLGVDCMLSGDSDMKSHNVVESLHSKKQQILLSTQLVK 526
            .:...:|..:....|.|. |.|:..    |::|      :.|:..|::|:
  Fly   484 AMVVAKVENQAGDYGYDA-LKGEYG----NLIE------KGIIDPTKVVR 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT5NP_523707.1 TCP1_epsilon 11..536 CDD:239455 129/570 (23%)
Cpn60_TCP1 45..534 CDD:278544 126/550 (23%)
Hsp60ANP_511115.2 PTZ00114 12..549 CDD:185455 129/570 (23%)
GroEL 24..544 CDD:239460 129/570 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453421
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.