DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT5 and tcp1

DIOPT Version :9

Sequence 1:NP_523707.1 Gene:CCT5 / 36308 FlyBaseID:FBgn0010621 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_571305.1 Gene:tcp1 / 30477 ZFINID:ZDB-GENE-990714-24 Length:556 Species:Danio rerio


Alignment Length:536 Identity:173/536 - (32%)
Similarity:282/536 - (52%) Gaps:25/536 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 KRITGTDAIKTHIMAARQIASTLKTSLGPKGLDKIMVSPDGDVTVTNDGATIMKLMEVDHEIAKL 91
            :|.||......::|||..||:.:|:||||.||||::|...||||:|||||||:||:||:|..||:
Zfish    11 QRTTGESVRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKV 75

  Fly    92 MVQLSQSQDDEIGDGTTGVVVLAGALLEQAEGLIDRGIHPIRIADGFELAAQCAIKQLDAIAQPF 156
            :.:|::.||.|:|||||.||::|..||:.|:.|:.:.|||..|..|:.||.:.|::.::. ....
Zfish    76 LCELAELQDKEVGDGTTSVVIIAAELLKSADELVKQKIHPTSIISGYRLACKEAVRYINE-NLTI 139

  Fly   157 PVDPKNKEPLIQIAMTTLGSKIVNKCHRQMAEMAVDAVLNVADIEKKDV-NFELIKIET-KVGGR 219
            ..|...:|.|:..|.|::.|||:.......|.|.|||.:.|..::.|.| .:.:..:.. |..||
Zfish   140 GTDDLGRECLLNAAKTSMSSKIIGVDAEFFANMVVDAAVAVKFVDGKGVARYPINSVNVLKAHGR 204

  Fly   220 -MEDSMLVKGVIVDKTLSHSQMPKELRNVKLAILTCPFEPPKPKTKHKLDVTSAEDYRALREYEQ 283
             .::|.||.|..::.|:....|.|.:.|.|:|.|....:..|.|...::.:...|....:|:.|.
Zfish   205 SQKESFLVNGYALNCTVGSQGMVKRVANAKIACLDFSLQKTKMKLGVQVVINDPEKLDQIRQRES 269

  Fly   284 EKFTQMVKQVKDAGATLAICQWGFDDEANHLLLQQELPAVRWVGGPEIELIAIATGGRIVPRF-- 346
            :...:.|:::..:||.:.:...|.||......:.....|||.|...:::.||.|||..:....  
Zfish   270 DITKERVQKILASGANVVLTTGGIDDMCLKYFVDVGAMAVRRVLKKDLKRIAKATGATVCSSLSN 334

  Fly   347 ----EELTPEKLGVA-GLVREMAFGTSKDKMLVIEECKNSKAVTIFLRGGNAMIIAEAKRSIHDA 406
                |...|..||.| .:|:|.   ...|::::|:..|...:.:|.|||.|..:..|.:||:|||
Zfish   335 LEGEETFEPSMLGQAEEVVQER---VCDDELILIKNTKARTSASIILRGANDFMCDEMERSLHDA 396

  Fly   407 ICVVRSLVKDSRIVYGGGAAEISCSLAVAKEADQLSTLEQYAFRAFSVALESIPLALAENSGLHP 471
            :|||:.:::...:|.||||.|.:.|:.:...|..:.:.||.|...|:.:|..||..||.|:....
Zfish   397 LCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPKTLAVNAAQDS 461

  Fly   472 IETLSELKA----RQVAEKKSSL---GVDCMLSGDSDMKSHNVVESLHSKKQQILLSTQLVKMIL 529
            .:.:::|:|    .||...:.:|   |:|.:.....|.|...|.|....|.:.:..:|:....||
Zfish   462 TDLVAKLRAFHNEAQVNPDRKNLKWIGLDLVNGKPRDNKQAGVYEPTMVKTKSLKFATEAAITIL 526

  Fly   530 KIDDV----RSKNEGG 541
            :|||:    ..:.|||
Zfish   527 RIDDLIKLFPDQKEGG 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT5NP_523707.1 TCP1_epsilon 11..536 CDD:239455 170/529 (32%)
Cpn60_TCP1 45..534 CDD:278544 163/505 (32%)
tcp1NP_571305.1 chap_CCT_alpha 6..541 CDD:274081 170/533 (32%)
TCP1_alpha 10..536 CDD:239451 170/528 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60896
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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