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Protein Alignment CCT5 and Cct4

DIOPT Version :10

Sequence 1:	NP_523707.1	Gene:	CCT5 / 36308	FlyBaseID:	FBgn0010621	Length:	542	Species:	Drosophila melanogaster
Sequence 2:	NP_877966.1	Gene:	Cct4 / 29374	RGDID:	727937	Length:	539	Species:	Rattus norvegicus

Alignment Length:	525	Identity:	194/525 - (36%)
Similarity:	313/525 - (59%)	Gaps:	27/525 - (5%)

- Green bases have known domain annotations that are detailed below.

  Fly    21 RDQERQKRITGTDAIKTHIMAARQIASTLKTSLGPKGLDKIMVSPDGDVTVTNDGATIMKLMEVD 85
            ||:..|.|.       ::|.||:.:|..::|||||||:||::....||||:|||||||:|.|:|.
  Rat    27 RDKPAQIRF-------SNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVL 84

  Fly    86 HEIAKLMVQLSQSQDDEIGDGTTGVVVLAGALLEQAEGLIDRGIHPIRIADGFELAAQCAIKQLD 150
            |..|:::|:||::||.|.|||||.||::||:||:....|:.:||||..|::.|:.|.:..::.|.
  Rat    85 HPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLEILT 149

  Fly   151 AIAQPFPVDPKNKEPLIQIAMTTLGSKIVNKCHRQMAEMAVDAVLNVAD-IEKKDVNFELIKIET 214
            .:::  ||...::|.|:..|.|:|.||:|::....::.|:|:||:.|.| .....|:...|||..
  Rat   150 DMSR--PVQLSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKVIDPATATSVDLRDIKIVK 212

  Fly   215 KVGGRMEDSMLVKGVIVDKTLSHSQMPKELRNVKLAILTCPFEPPKPKTKHKLDVTSAEDY---- 275
            |:||.::|..||:|:::.:.:::|.:.: :...|:.::......||....:::.|:   ||
  Rat   213 KLGGTIDDCELVEGLVLTQKVANSGITR-VEKAKIGLIQFCLSAPKTDMDNQIVVS---DYAQMD 273

  Fly   276 RALREYEQEKFTQMVKQVKDAGATLAICQW-----GFDDEANHLLLQQELPAVRWVGGPEIELIA 335
            |.||| |:.....:|||:|..|..:.:.|.     ...|.|.|.|.:.::..|:.:...:||.|.
  Rat   274 RVLRE-ERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDIEREDIEFIC 337

  Fly   336 IATGGRIVPRFEELTPEKLGVAGLVREMAFGTSKDKMLVIEECKN-SKAVTIFLRGGNAMIIAEA 399
            ...|.:.|...::.||:.||.|.|..|::...| .|:..|..|.: .|.|||.:||.|.::|.||
  Rat   338 KTIGTKPVAHIDQFTPDMLGSAELAEEVSLNGS-GKLFKITGCTSPGKTVTIVVRGSNKLVIEEA 401

  Fly   400 KRSIHDAICVVRSLVKDSRIVYGGGAAEISCSLAVAKEADQLSTLEQYAFRAFSVALESIPLALA 464
            :||||||:||:|.|||...::.||||.||..:|.:.:.:..||.:|.|..|||:.|:|.||..||
  Rat   402 ERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLA 466

  Fly   465 ENSGLHPIETLSELKARQVAEKKSSLGVDCMLSGDSDMKSHNVVESLHSKKQQILLSTQLVKMIL 529
            ||:||:||.|::||:.|. |:.:.:.|::....|.|::....||:.|......:.|:|:.|:.||
  Rat   467 ENAGLNPISTVTELRNRH-AQGEKTTGINVRKGGISNILEEMVVQPLLVSVSALTLATETVRSIL 530

  Fly   530 KIDDV 534
            |||||
  Rat   531 KIDDV 535

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.