DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT5 and hspd1

DIOPT Version :9

Sequence 1:NP_523707.1 Gene:CCT5 / 36308 FlyBaseID:FBgn0010621 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_851847.1 Gene:hspd1 / 282676 ZFINID:ZDB-GENE-021206-1 Length:575 Species:Danio rerio


Alignment Length:597 Identity:129/597 - (21%)
Similarity:231/597 - (38%) Gaps:153/597 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 GTDAIKTHIMAARQIASTLKTSLGPKGLDKIMVSPDGDVTVTNDGATIMKLMEVDHEI----AKL 91
            |.||....:.....:|..:..::||||...|:....|...||.||.|:.|.:::....    |||
Zfish    33 GADARALMLQGVDLLADAVAVTMGPKGRTVIIEQSWGSPKVTKDGVTVAKSIDLKDRYKNIGAKL 97

  Fly    92 MVQLSQSQDDEIGDGTTGVVVLAGALLEQAEGLIDRGIHPIRIADGFELAAQCAIKQLDAIAQPF 156
            :..::.:.::|.|||||...|||.|:.::....|.:|.:|:.|..|..:|.:..|.:|...::|.
Zfish    98 VQDVANNTNEEAGDGTTTATVLARAVAKEGFDTISKGANPVEIRRGVMMAVEEVISELKKNSKPV 162

  Fly   157 PVDPKNKEPLIQIAM------TTLGSKIVNKCHRQMAEMAVDAVLNVADIEKKDVNFELIK---- 211
                ...|.:.|:|.      |.:|:.|.|    .|.::....|:.|.|.:......|:|:    
Zfish   163 ----TTPEEIAQVATISANGDTEVGNIISN----AMKKVGRKGVITVKDGKTLHDELEIIEGMKF 219

  Fly   212 ---------IETKVGGRME--DSMLVKGVIVDKTLSHSQ--MPK-ELRNVKLAILTCPFEPPKPK 262
                     |.|..|.:.|  |:.:   ::.:|.:|..|  :|. |:.|          :..||.
Zfish   220 DRGYISPYFINTAKGQKCEFQDAYV---LLSEKKISSVQSIVPALEIAN----------QHRKPL 271

  Fly   263 TKHKLDVTSAEDY--RALREYEQEKFTQMVKQVKDAGATLAICQWGFDDEANHLLLQQELPAVRW 325
                  |..|||.  .||.       |.::.::|.....:|:...||.|...:            
Zfish   272 ------VIVAEDVDGEALS-------TLVLNRLKVGLQVVAVKAPGFGDNRKN------------ 311

  Fly   326 VGGPEIELIAIATGGRIVPRFEELTPEKLGVA---------GLVREMAFGTSKDKMLV------- 374
                :::.:|::|||.:      ...|.:|:|         |.|.|:.. |..|.||:       
Zfish   312 ----QLQDMAVSTGGTV------FGDEAMGLALEDIQAHDFGKVGEVIV-TKDDTMLLKGRGDAS 365

  Fly   375 -IEE-------------------------CKNSKAVTIFLRGGNAMI-IAEAKRSIHDAICVVRS 412
             ||:                         .|.|..|.:...||.:.: :.|.|..:.||:...|:
Zfish   366 AIEKRVNEIAEQLESTNSDYEKEKLNERLAKLSDGVAVIKVGGTSDVEVNEKKDRVTDALNATRA 430

  Fly   413 LVKDSRIVYGGGAAEISCSLAV----AKEADQLSTLEQYAFRAFSVALESIPLALAENSGLHPIE 473
            .|::. ||.|||.|.:.|..|:    ...|||     :........:|....:.:|:|:|:.   
Zfish   431 AVEEG-IVPGGGCALLRCIPALDNIKPANADQ-----KIGIDIIRRSLRIPAMTIAKNAGVE--- 486

  Fly   474 TLSELKARQVAEKKSSLGVDCMLSGDSDMKSHNVVESLHSKKQQILLSTQLVKMILKIDDV---- 534
              ..|...::.:..:.:|.|.|.....:|....:::.....:..:|.:..:..::...:.|    
Zfish   487 --GSLVVEKILQSSTEIGYDAMNGEYVNMVERGIIDPTKVVRTALLDAAGVASLLSTAEAVVTEI 549

  Fly   535 -RSKNE---GGM 542
             :.:.|   |||
Zfish   550 PKEEKEMPAGGM 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT5NP_523707.1 TCP1_epsilon 11..536 CDD:239455 125/586 (21%)
Cpn60_TCP1 45..534 CDD:278544 121/565 (21%)
hspd1NP_851847.1 PTZ00114 24..558 CDD:185455 126/592 (21%)
GroEL 28..548 CDD:239460 125/582 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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