DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT5 and Tcp1

DIOPT Version :9

Sequence 1:NP_523707.1 Gene:CCT5 / 36308 FlyBaseID:FBgn0010621 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_036802.1 Gene:Tcp1 / 24818 RGDID:3832 Length:556 Species:Rattus norvegicus


Alignment Length:544 Identity:180/544 - (33%)
Similarity:292/544 - (53%) Gaps:40/544 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 RITGTDAIKT-HIMAARQIASTLKTSLGPKGLDKIMVSPDGDVTVTNDGATIMKLMEVDHEIAKL 91
            |.|| :||:: ::|||..||:.:|:||||.||||::|...||||:|||||||:||:||:|..||:
  Rat    11 RSTG-EAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKV 74

  Fly    92 MVQLSQSQDDEIGDGTTGVVVLAGALLEQAEGLIDRGIHPIRIADGFELAAQCAIKQL--DAIAQ 154
            :.:|:..||.|:|||||.||::|..||:.|:.|:.:.|||..:..|:.||.:.|::.:  :.|..
  Rat    75 LCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYINENLIIN 139

  Fly   155 PFPVDPKNKEPLIQIAMTTLGSKIVNKCHRQMAEMAVDAVLNV--ADIE---KKDVNFELIKIET 214
               .|...::.||..|.|::.|||:.......|.|.|||||.|  .||.   :..||...|   .
  Rat   140 ---TDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAVKYTDIRGQPRYPVNSVNI---L 198

  Fly   215 KVGGRME-DSMLVKGVIVDKTLSHSQMPKELRNVKLAILTCPFEPPKPKTKHKLDVTSAEDYRAL 278
            |..||.: :|||:.|..::..:....|.|.:.|.|:|.|....:..|.|...::.:|..|....:
  Rat   199 KAHGRSQIESMLINGYALNCVVGSQGMLKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQI 263

  Fly   279 REYEQEKFTQMVKQVKDAGATLAICQWGFDDEANHLLLQQELPAVRWVGGPEIELIAIATGGRIV 343
            |:.|.:...:.::::...||.:.:...|.||......::....|||.|...:::.||.|:|..|:
  Rat   264 RQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIAKASGASIL 328

  Fly   344 PRFEELTPEK------LGVA-GLVREMAFGTSKDKMLVIEECKNSKAVTIFLRGGNAMIIAEAKR 401
            .....|..|:      ||.| .:|:|.   ...|::::|:..|...:.:|.|||.|..:..|.:|
  Rat   329 STLANLEGEETFEATMLGQAEEVVQER---ICDDELILIKNTKARTSASIILRGANDFMCDEMER 390

  Fly   402 SIHDAICVVRSLVKDSRIVYGGGAAEISCSLAVAKEADQLSTLEQYAFRAFSVALESIPLALAEN 466
            |:|||:|||:.:::...:|.||||.|.:.|:.:...|..:.:.||.|...|:.:|..||..||.|
  Rat   391 SLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVN 455

  Fly   467 SGLHPIETLSELKA----RQVAEKKSSL---GVDCMLSGDSDMKSHNVVESLHSKKQQILLSTQL 524
            :.....:.:::|:|    .||..::.:|   |:|.:.....|.|...|.|....|.:.:..:|:.
  Rat   456 AAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVHGKPRDNKQAGVFEPTIVKVKSLKFATEA 520

  Fly   525 VKMILKIDDV-----RSKNE--GG 541
            ...||:|||:     .||::  ||
  Rat   521 AITILRIDDLIKLHPESKDDKHGG 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT5NP_523707.1 TCP1_epsilon 11..536 CDD:239455 176/535 (33%)
Cpn60_TCP1 45..534 CDD:278544 167/510 (33%)
Tcp1NP_036802.1 TCP1_alpha 9..535 CDD:239451 176/533 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60896
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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