DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT5 and Tcp1

DIOPT Version :9

Sequence 1:NP_523707.1 Gene:CCT5 / 36308 FlyBaseID:FBgn0010621 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_038714.2 Gene:Tcp1 / 21454 MGIID:98535 Length:556 Species:Mus musculus


Alignment Length:532 Identity:170/532 - (31%)
Similarity:279/532 - (52%) Gaps:37/532 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 RITGTDAIKTHIMAARQIASTLKTSLGPKGLDKIMVSPDGDVTVTNDGATIMKLMEVDHEIAKLM 92
            |.||......::|||..||:.:|:|.||.||||::|...||||:|||||||:||:||:|..||::
Mouse    11 RSTGEAVRSQNVMAAASIANIVKSSFGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVL 75

  Fly    93 VQLSQSQDDEIGDGTTGVVVLAGALLEQAEGLIDRGIHPIRIADGFELAAQCAIKQL--DAIAQP 155
            .:|:..||.|:|||||.||::|..||:.|:.|:.:.|||..:..|:.||.:.|::.:  :.|.. 
Mouse    76 CELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYINENLIIN- 139

  Fly   156 FPVDPKNKEPLIQIAMTTLGSKIVNKCHRQMAEMAVDAVLNVADIEKK--------DVNFELIKI 212
              .|...::.||..|.|::.|||:.......|.|.|||||.|...:.:        .||.     
Mouse   140 --TDELGRDCLINAAKTSMSSKIIGINGDYFANMVVDAVLAVKYTDARGQPRYPVNSVNI----- 197

  Fly   213 ETKVGGRME-DSMLVKGVIVDKTLSHSQMPKELRNVKLAILTCPFEPPKPKTKHKLDVTSAEDYR 276
             .|..||.: :|||:.|..::..:....|||.:.|.|:|.|....:..|.|...::.:|..|...
Mouse   198 -LKAHGRSQIESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLD 261

  Fly   277 ALREYEQEKFTQMVKQVKDAGATLAICQWGFDDEANHLLLQQELPAVRWVGGPEIELIAIATGGR 341
            .:|:.|.:...:.::::...||.:.:...|.||......::....|||.|...:::.:|.|:|..
Mouse   262 QIRQRESDITKERIQKILATGANVILTTGGIDDMYLKYFVEAGAMAVRRVLKRDLKHVAKASGAS 326

  Fly   342 IVPRFEELTPEK------LGVA-GLVREMAFGTSKDKMLVIEECKNSKAVTIFLRGGNAMIIAEA 399
            |:.....|..|:      ||.| .:|:|.   ...|::::|:..|...:.:|.|||.|..:..|.
Mouse   327 ILSTLANLEGEETFEVTMLGQAEEVVQER---ICDDELILIKNTKARTSASIILRGANDFMCDEM 388

  Fly   400 KRSIHDAICVVRSLVKDSRIVYGGGAAEISCSLAVAKEADQLSTLEQYAFRAFSVALESIPLALA 464
            :||:|||:|||:.:::...:|.||||.|.:.|:.:...|..:.:.||.|...|:.:|..||..||
Mouse   389 ERSLHDALCVVKRVLELKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLA 453

  Fly   465 ENSGLHPIETLSELKA----RQVAEKKSSL---GVDCMLSGDSDMKSHNVVESLHSKKQQILLST 522
            .|:.....:.:::|:|    .||..::.:|   |:|.:.....|.|...|.|....|.:.:..:|
Mouse   454 VNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVHGKPRDNKQAGVFEPTIVKVKSLKFAT 518

  Fly   523 QLVKMILKIDDV 534
            :....||:|||:
Mouse   519 EAAITILRIDDL 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT5NP_523707.1 TCP1_epsilon 11..536 CDD:239455 170/532 (32%)
Cpn60_TCP1 45..534 CDD:278544 163/513 (32%)
Tcp1NP_038714.2 chap_CCT_alpha 5..540 CDD:274081 170/532 (32%)
TCP1_alpha 9..535 CDD:239451 170/532 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60896
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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