DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT5 and cct-4

DIOPT Version :9

Sequence 1:NP_523707.1 Gene:CCT5 / 36308 FlyBaseID:FBgn0010621 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_495750.1 Gene:cct-4 / 174330 WormBaseID:WBGene00000379 Length:540 Species:Caenorhabditis elegans


Alignment Length:525 Identity:195/525 - (37%)
Similarity:312/525 - (59%) Gaps:24/525 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RDQERQKRITGTDAIKTHIMAARQIASTLKTSLGPKGLDKIMVSPDGDVTVTNDGATIMKLMEVD 85
            :|:::.:.:.     .::|:||:.:|..::|||||:|:||::.|.:||||:|||||||:..|.|.
 Worm    24 KDKDKPESVR-----NSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVI 83

  Fly    86 HEIAKLMVQLSQSQDDEIGDGTTGVVVLAGALLEQAEGLIDRGIHPIRIADGFELAAQCAIKQLD 150
            |..||::|:||::||.|.|||||.|||:|||||:.|:.|:.:||||..|::.|:.||..|.|.||
 Worm    84 HPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILD 148

  Fly   151 AIAQPFPVDPKNKEPLIQIAMTTLGSKIVNKCHRQMAEMAVDAVLNVADIEK-KDVNFELIKIET 214
            .::.  |||..|...|.::|.|:|.||:|::....:|.|||:||..:.:.|. .:||.::|||..
 Worm   149 EMSS--PVDLSNDALLNKMATTSLNSKVVSQHSWLLAPMAVNAVKKIINSENDSNVNLKMIKIIK 211

  Fly   215 KVGGRMEDSMLVKGVIVDKTLSHSQMPKELRNVKLAILTCPFEPPKPKTKHKLDVTSAEDY---- 275
            |:|..:|:|.|::|.::|:.......|..:...|:.::.....|||...::::.:|   ||    
 Worm   212 KMGDTVEESELIEGALIDQKTMGRGAPTRIEKAKIGLIQFQISPPKTDMENQVIIT---DYAQMD 273

  Fly   276 RALREYEQEKFTQMVKQVKDAGATLAICQWGF-----DDEANHLLLQQELPAVRWVGGPEIELIA 335
            |||:| |::...::.||:|.||..:.:.|...     ::.|.|.|.:.::..::.:...:||..:
 Worm   274 RALKE-ERQYLLEICKQIKAAGCNVLLIQKSILRDAVNELALHFLAKMKIMCIKDIEREDIEFYS 337

  Fly   336 IATGGRIVPRFEELTPEKLGVAGLVREMAFGTSKDKMLVIEECKN-SKAVTIFLRGGNAMIIAEA 399
            ...|.|.|...:....:.||.|.||.|:..| ...|::.:...:| ..||:|.|||.|.:::.||
 Worm   338 RILGCRPVASVDHFNADALGYADLVEEIPTG-GDGKVIKVTGVQNPGHAVSILLRGSNKLVLEEA 401

  Fly   400 KRSIHDAICVVRSLVKDSRIVYGGGAAEISCSLAVAKEADQLSTLEQYAFRAFSVALESIPLALA 464
            .||||||:||:|.|||...::.||||.|:..::.:...|.......||.:|||:.|||.||..||
 Worm   402 DRSIHDALCVIRCLVKKKALLPGGGAPEMEIAVKLRNLAQTQHGATQYCWRAFADALELIPYTLA 466

  Fly   465 ENSGLHPIETLSELKARQVAEKKSSLGVDCMLSGDSDMKSHNVVESLHSKKQQILLSTQLVKMIL 529
            ||:||.||.|::||:... |...||.||:......:||...:||:.|......|..:::.|:.||
 Worm   467 ENAGLSPIHTVTELRNNH-ANGNSSYGVNVRKGYVTDMVEEDVVQPLLVTASAIKQASECVRSIL 530

  Fly   530 KIDDV 534
            ||||:
 Worm   531 KIDDI 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT5NP_523707.1 TCP1_epsilon 11..536 CDD:239455 195/525 (37%)
Cpn60_TCP1 45..534 CDD:278544 190/499 (38%)
cct-4NP_495750.1 chap_CCT_delta 23..539 CDD:274083 195/525 (37%)
Cpn60_TCP1 48..539 CDD:278544 190/496 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60896
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.830

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