DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT5 and cct-1

DIOPT Version :9

Sequence 1:NP_523707.1 Gene:CCT5 / 36308 FlyBaseID:FBgn0010621 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_495722.1 Gene:cct-1 / 174318 WormBaseID:WBGene00000377 Length:549 Species:Caenorhabditis elegans


Alignment Length:527 Identity:174/527 - (33%)
Similarity:282/527 - (53%) Gaps:26/527 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 KRITGTDAIKTHIMAARQIASTLKTSLGPKGLDKIMVSPDGDVTVTNDGATIMKLMEVDHEIAKL 91
            ||.||......::.||..||:.:|:||||.||||::|...|||.||||||||:|.:||:|...|:
 Worm    14 KRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKV 78

  Fly    92 MVQLSQSQDDEIGDGTTGVVVLAGALLEQAEGLIDRGIHPIRIADGFELAAQCAIKQLDAIAQPF 156
            :|:|:|.||:|:|||||.||::|..||::|:.|:.:.:||..|.:|:.||.:.|:|.:..... |
 Worm    79 LVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENIS-F 142

  Fly   157 PVDPKNKEPLIQIAMTTLGSKIVNKCHRQMAEMAVDA--VLNVADIEKKDVNFELIKIETKVGGR 219
            ..|...::.::..|.|::.|||:........|:.|||  .:.|.:..|.......:.:....|..
 Worm   143 TSDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRVENNGKVTYPINAVNVLKAHGKS 207

  Fly   220 MEDSMLVKGVIVDKTLSHSQMPKELRNVKLAILTCPFEPPKPKTKHKLDVTSAEDYRALREYEQE 284
            ..:|:||||..::.|::...||..::|.|:|.|  .|...|.|....:.|. .||...|....:|
 Worm   208 ARESVLVKGYALNCTVASQAMPLRVQNAKIACL--DFSLMKAKMHLGISVV-VEDPAKLEAIRRE 269

  Fly   285 KF---TQMVKQVKDAGATLAICQWGFDDEANHLLLQQELPAVRWVGGPEIELIAIATGGRIVPRF 346
            :|   .:.:.::..|||.:.:...|.||......::....|||.....:::.||.|||..:....
 Worm   270 EFDITKRRIDKILKAGANVVLTTGGIDDLCLKQFVESGAMAVRRCKKSDLKRIAKATGATLTVSL 334

  Fly   347 EELTPEK------LGVAG-LVREMAFGTSKDKMLVIEECKNSKAVTIFLRGGNAMIIAEAKRSIH 404
            ..|..::      ||.|. :|:|.   .|.|::::|:..|:..|.:|.|||.|.:::.|.:||:|
 Worm   335 ATLEGDEAFDASLLGHADEIVQER---ISDDELILIKGPKSRTASSIILRGANDVMLDEMERSVH 396

  Fly   405 DAICVVRSLVKDSRIVYGGGAAEISCSLAVAKEADQLSTLEQYAFRAFSVALESIPLALAENSGL 469
            |::||||.:::..::|.||||.|.|.||.:...|..||:.||.|...|:.||..||..||.|:..
 Worm   397 DSLCVVRRVLESKKLVAGGGAVETSLSLFLETYAQTLSSREQLAVAEFASALLIIPKVLASNAAR 461

  Fly   470 HPIETLSELKA----RQVAEKKSSL---GVDCMLSGDSDMKSHNVVESLHSKKQQILLSTQLVKM 527
            ...:.:::|:|    .|:..:...|   |:|.......|.|...::|...||.:.:..:|:....
 Worm   462 DSTDLVTKLRAYHSKAQLIPQLQHLKWAGLDLEEGTIRDNKEAGILEPALSKVKSLKFATEAAIT 526

  Fly   528 ILKIDDV 534
            ||:|||:
 Worm   527 ILRIDDL 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT5NP_523707.1 TCP1_epsilon 11..536 CDD:239455 174/527 (33%)
Cpn60_TCP1 45..534 CDD:278544 167/507 (33%)
cct-1NP_495722.1 chap_CCT_alpha 9..543 CDD:274081 174/527 (33%)
TCP1_alpha 13..538 CDD:239451 174/527 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60896
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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