DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT5 and cct-3

DIOPT Version :9

Sequence 1:NP_523707.1 Gene:CCT5 / 36308 FlyBaseID:FBgn0010621 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_494218.2 Gene:cct-3 / 173581 WormBaseID:WBGene00018782 Length:543 Species:Caenorhabditis elegans


Alignment Length:538 Identity:151/538 - (28%)
Similarity:288/538 - (53%) Gaps:20/538 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 RPFIILRDQERQKRITGTDAIKTHIMAARQIASTLKTSLGPKGLDKIMVSPDGDVTVTNDGATIM 79
            :|.|:|  .:..||.:|......:|.|.:.||..::|||||:.:.|:::.|.|.:.:||||..|:
 Worm     7 QPIIVL--SQGTKRESGHQVQIGNINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAIL 69

  Fly    80 KLMEVDHEIAKLMVQLSQSQDDEIGDGTTGVVVLAGALLEQAEGLIDRGIHPIRIADGFELAAQC 144
            :.:.|.|..||.|::::::||:|.|||||.|::|||.::..|:..:::..||..|...:..|.:.
 Worm    70 REITVKHPAAKSMIEIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLIIKAYRQALED 134

  Fly   145 AIKQLDAIAQPF--PVDPKNKEPLIQIAMTTLGSKIVNKCHRQMAEMAVDAVLNV----ADIEKK 203
            .|:..:   ..|  .||..:...:.::..:.||:|:::|.......:::.||..:    |.:.:.
 Worm   135 MIQWSE---NKFSKTVDITDDAEIAKVVKSCLGTKMISKWMDLAVNISIQAVKTIRVEKAGVREI 196

  Fly   204 DVNFELIKIETKVGGRMEDSMLVKGVIVDKTLSHSQMPKELRNVKLAILTCPFEPPKPKTKHKLD 268
            |:. ...:||...|||:|||.:|||::|:|.:.|::|.:.:.|.::.:|.|..|..|.:::..|:
 Worm   197 DIK-RYCRIEKIPGGRIEDSQVVKGIVVNKDILHAKMRRRIENPRIVLLDCNLEYKKGESQTSLE 260

  Fly   269 VTSAEDYRALREYEQEKFTQMVKQVKDAGATLAICQWGFDDEANHLLLQQELPAVRWVGGPEIEL 333
            :...||..|:.|.|::...:...::......|...:.|..|.|.|.||:..:..:|.:...:...
 Worm   261 IMREEDISAILEQEEQAIRKQCDEIIKLKPDLVFTEKGISDLAQHFLLKAGITCLRRLKKTDNNR 325

  Fly   334 IAIATGGRIVPRFEELTPEKLGVAGLVREMAFGTSKDKMLVIEECKNSKAVTIFLRGGNAMIIAE 398
            :|...|.|:|....:|..|.:|....:.|:.  ...|:.......:.:.|.|:.|||.:..:|.|
 Worm   326 LARVCGARVVHDTSDLRDEDVGTKAQLFEVV--KIADEYYTYVTAETTTACTVVLRGPSKDVINE 388

  Fly   399 AKRSIHDAICVVRSLVKDSRIVYGGGAAEISCSLAVAKEADQLSTLEQYAFRAFSVALESIPLAL 463
            .:|::.|::.|||:::.:.::|.||||.|::.|..:.::..::..::::.::|..:|||.||..|
 Worm   389 VERNLQDSLHVVRNIMINPKLVPGGGALEMALSREIEQQGAKMDGVKKWPYKAIGLALEVIPRTL 453

  Fly   464 AENSGLHPIETLSELKARQVAEKKS-SLGVDCMLSGD-SDMKSHNVVESLHSKKQQILLSTQLVK 526
            .:|.|...|..::||:|......:: :.||| ..||| .||....:.:.|..:.|.:..:.:...
 Worm   454 IQNCGGSTIRKMTELRAIHAQNAENWTFGVD-GTSGDLVDMNKLEIWDPLAVRIQVLKTAIETSV 517

  Fly   527 MILKIDDVRS---KNEGG 541
            |:|:|||:.|   |..||
 Worm   518 MLLRIDDIVSGTKKAVGG 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT5NP_523707.1 TCP1_epsilon 11..536 CDD:239455 147/528 (28%)
Cpn60_TCP1 45..534 CDD:278544 138/496 (28%)
cct-3NP_494218.2 chap_CCT_gamma 8..531 CDD:274085 148/531 (28%)
TCP1_gamma 8..528 CDD:239453 147/528 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100235
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.720

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