DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT5 and Hspd1

DIOPT Version :9

Sequence 1:NP_523707.1 Gene:CCT5 / 36308 FlyBaseID:FBgn0010621 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_001343441.1 Gene:Hspd1 / 15510 MGIID:96242 Length:573 Species:Mus musculus


Alignment Length:582 Identity:137/582 - (23%)
Similarity:230/582 - (39%) Gaps:126/582 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 GTDAIKTHIMAARQIASTLKTSLGPKGLDKIMVSPDGDVTVTNDGATIMKLMEVDHEI----AKL 91
            |.||....:.....:|..:..::||||...|:....|...||.||.|:.|.:::..:.    |||
Mouse    33 GADARALMLQGVDLLADAVAVTMGPKGRTVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKL 97

  Fly    92 MVQLSQSQDDEIGDGTTGVVVLAGALLEQAEGLIDRGIHPIRIADGFELAAQCAIKQLDAIAQPF 156
            :..::.:.::|.|||||...|||.::.::....|.:|.:|:.|..|..||....|.:|...::|.
Mouse    98 VQDVANNTNEEAGDGTTTATVLARSIAKEGFEKISKGANPVEIRRGVMLAVDAVIAELKKQSKPV 162

  Fly   157 PVDPKNKEPLIQIA-MTTLGSK-IVNKCHRQMAEMAVDAVLNVADIEKKDVNFELIKIETKVGGR 219
                ...|.:.|:| ::..|.| |.|.....|.::....|:.|.|  .|.:|.||..||    |.
Mouse   163 ----TTPEEIAQVATISANGDKDIGNIISDAMKKVGRKGVITVKD--GKTLNDELEIIE----GM 217

  Fly   220 MEDSMLVKGVIVDKTLSHSQMPKELRNVKLAILTCPFEPPKPKTKHKLDVTSAEDYRALREYEQE 284
            ..|    :|.|....::.|:..|           |.|:               :.|..|.|.:..
Mouse   218 KFD----RGYISPYFINTSKGQK-----------CEFQ---------------DAYVLLSEKKIS 252

  Fly   285 KFTQMVKQVKDAGA---TLAICQWGFDDEA------NHLLLQQELPAVRWVG-----GPEIELIA 335
            ....:|..::.|.|   .|.|.....|.||      |.|.:..::.||:..|     ..:::.:|
Mouse   253 SVQSIVPALEIANAHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAVKAPGFGDNRKNQLKDMA 317

  Fly   336 IATGGRIVP------RFEELTPEKLGVAGLVREMAFGTSKDKMLV------------IEE----- 377
            |||||.:..      ..|::....||..|.|    ..|..|.||:            |:|     
Mouse   318 IATGGAVFGEEGLNLNLEDVQAHDLGKVGEV----IVTKDDAMLLKGKGDKAHIEKRIQEITEQL 378

  Fly   378 ----------------CKNSKAVTIFLRGGNAMI-IAEAKRSIHDAICVVRSLVKDSRIVYGGGA 425
                            .|.|..|.:...||.:.: :.|.|..:.||:...|:.|::. ||.|||.
Mouse   379 DITTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDRVTDALNATRAAVEEG-IVLGGGC 442

  Fly   426 AEISC-----SLAVAKEADQLSTLEQYAFRAFSVALESIPLALAENSGLHPIETLSELKARQVAE 485
            |.:.|     ||..|.| ||...:|     ....||:...:.:|:|:|:.     ..|...::.:
Mouse   443 ALLRCIPALDSLKPANE-DQKIGIE-----IIKRALKIPAMTIAKNAGVE-----GSLIVEKILQ 496

  Fly   486 KKSSLGVDCMLSGDSDMKSHNVVESLHSKKQQILLSTQLVKMILKIDDV-----RSKNEGGM 542
            ..|.:|.|.||....:|....:::.....:..:|.:..:..::...:.|     :.:.:.||
Mouse   497 SSSEVGYDAMLGDFVNMVEKGIIDPTKVVRTALLDAAGVASLLTTAEAVVTEIPKEEKDPGM 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT5NP_523707.1 TCP1_epsilon 11..536 CDD:239455 135/574 (24%)
Cpn60_TCP1 45..534 CDD:278544 131/553 (24%)
Hspd1NP_001343441.1 GroEL 28..548 CDD:239460 135/570 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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