DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT5 and Cct6b

DIOPT Version :9

Sequence 1:NP_523707.1 Gene:CCT5 / 36308 FlyBaseID:FBgn0010621 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_033969.2 Gene:Cct6b / 12467 MGIID:1329013 Length:531 Species:Mus musculus


Alignment Length:520 Identity:158/520 - (30%)
Similarity:275/520 - (52%) Gaps:36/520 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 AIKTHIMAARQIASTLKTSLGPKGLDKIMVSPDGDVTVTNDGATIMKLMEVDHEIAKLMVQLSQS 98
            |:..:|.|||.:...|:.:|||||..|::||..||:.:|.||..::..|::.|..|.::.:::.:
Mouse    19 ALAVNICAARGLQDVLRPTLGPKGALKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASIIAKVAAA 83

  Fly    99 QDDEIGDGTTGVVVLAGALLEQAEGLIDRGIHPIRIADGFELAAQCAIKQLDAIAQPFPVDPKNK 163
            ||...|||||..|::.|.||:||:..|..|:||..|.:||::|...|::.||.|    .|..:.|
Mouse    84 QDHVTGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFDVAKTKALEVLDEI----KVQKEMK 144

  Fly   164 -EPLIQIAMTTLGSKIVNKCHRQMAEMAVDAVL-NVADIEKKDVNFELIKIE-TKVGGRME-DSM 224
             |.|:.:|.|:|.:|:    |.::|::..:||: :|..|.:..|..:|..:| .::..:.| |:.
Mouse   145 REILLDVARTSLQTKV----HAELADILTEAVVDSVLAIRRPGVPIDLFMVEIVEMRHKSETDTQ 205

  Fly   225 LVKGVIVDKTLSHSQMPKELRNVKLAILTCPFEPPKPKTKHKLDVTSAEDYRALREYE-----QE 284
            |::|:::|....|.:|.|::|:.  .||||.......||    :|:|...|:.:.|.|     :.
Mouse   206 LIRGLVLDHGARHPRMRKQVRDA--YILTCNVSLEYEKT----EVSSGFFYKTVEEKEKLVKAER 264

  Fly   285 KFTQ-MVKQVKDA---------GATLAICQWGFDDEANHLLLQQELPAVRWVGGPEIELIAIATG 339
            ||.: .|:::.|.         ...:.|.|.|.|..:..:|.:..:.|:|......:|.:.:|.|
Mouse   265 KFIEDRVQKIIDLKQKVCAESNKGFVVINQKGIDPVSLEMLAKHNIVALRRAKRRNLERLTLACG 329

  Fly   340 GRIVPRFEELTPEKLGVAGLVREMAFGTSKDKMLVIEECKNSKAVTIFLRGGNAMIIAEAKRSIH 404
            |..|..||.|:.|.||.||||.|.|.|  ::|...||:|.|..:||:.::|.|...:.:.|.::.
Mouse   330 GLAVNSFEGLSEECLGHAGLVFEYALG--EEKFTFIEDCVNPLSVTLLVKGPNKHTLIQIKDALR 392

  Fly   405 DAICVVRSLVKDSRIVYGGGAAEISCSLAVAKEADQLSTLEQYAFRAFSVALESIPLALAENSGL 469
            |.:..|::.::|..:|.|.||.|::.:.|:.....::....:...:||:.||..||..||:|||.
Mouse   393 DGLRAVKNAIEDGCVVPGAGAVEVAIAEALVNYKHRVQGRVRLGIQAFADALLIIPKVLAQNSGY 457

  Fly   470 HPIETLSELKARQVAEKKSSLGVDCMLSGDSDMKSHNVVESLHSKKQQILLSTQLVKMILKIDDV 534
            ...|||.:::.:. ||.|..||:|.............:.::...||..:...|.:...||.:|::
Mouse   458 DLQETLIKIQTKH-AESKELLGIDLNTGEPMAAAEAGIWDNYCVKKHLLHSCTVIATNILLVDEI 521

  Fly   535  534
            Mouse   522  521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT5NP_523707.1 TCP1_epsilon 11..536 CDD:239455 158/520 (30%)
Cpn60_TCP1 45..534 CDD:278544 153/507 (30%)
Cct6bNP_033969.2 chap_CCT_zeta 3..530 CDD:274088 158/520 (30%)
TCP1_zeta 8..526 CDD:239458 158/520 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.